Pseudoduganella plicata: E1742_14025
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Entry
E1742_14025 CDS
T06563
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
mpli
Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpli03009
]
E1742_14025
Ribosome biogenesis [BR:
mpli03009
]
Prokaryotic type
ribosomal protein modification factors
E1742_14025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
QBQ37167
LinkDB
All DBs
Position
complement(3208487..3210154)
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AA seq
555 aa
AA seq
DB search
MNDIASLMDFVRSVPADASVDSDGTAAPAATVAVIATATTLALLPVTGAGDDHRAHLLAF
AGEFSAFPLFQRRWRWSAMLQVQLTTLLARLATQPPERDCVFLYLEGAFSKRYYPGPRAG
AAAPATADGRRDCRTGTADLDGAVRVFGNASVLGLTLQPSPGGDSYHCYDPGTGLLGIGR
GSTDRQRMRGAILEFCERWAGRNVPRAARLATYAELGEAALRPDQIADVPRQQSPRLFPG
FAEDRALHWLPCRLVHAKAQRLVPLQMINYLLQPGHLFSHGQNSNGCALGSTADEAALFG
ALELIERDALLLAWYSRSTPPRFVAATVDHAPARQLYALLQLAGYDVRCFDITTEFAIPS
VLVLLLGREEGRLAAFVTAACHPDPCEAIVAALGEAHSLVGVSERNLGRHRRQHAGGSVA
HLRDSAQALYYGQDGQRHHFDFLTAAPETLAWQDFVATHAGSATTASQGPAAAWQMLGAR
AAGAGYELVVADITPPGLPSLGLHGARVFIPGTLPLTFGDKPLCLPAGRLARAALACAWV
NALADLTEPLLHPLG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgatatcgcgtcgctgatggacttcgtgcgcagtgtgcccgccgatgccagcgtc
gatagcgatggcacggcggcgccggcggccacggttgcggtgatcgccaccgccacgacg
ctggcgctgctgccggtcaccggggcgggggacgaccatcgcgcccacctgctggcattc
gctggcgaattcagcgcgtttccgctgttccagcgcagatggcgctggagtgccatgctg
caggtgcagctgacaacactgctggcgcgcctcgccacgcagccgcccgagcgcgattgt
gtgttcctctatctcgagggcgcgttcagcaagcgctattacccgggaccgcgggccggc
gccgcggcgcctgccacagcggatgggcggcgcgattgccggaccggcacggccgatctg
gatggcgccgtgcgcgtgttcggcaacgcctcggtgctgggcctgacgctgcagcccagt
cccggcggcgacagttatcactgctacgatccgggcaccggcttgctgggcatcggccgt
ggcagcacggaccgccagcgcatgcgcggcgccatcctggaattctgcgaacgctgggcg
ggccgcaacgtgccgcgggcggcgcgcctggccacgtatgcggaactgggcgaggccgca
ttgcgtcccgaccagatcgccgatgtgccgcggcagcagtcgccacggctcttcccgggc
tttgccgaggaccgggcgctgcactggctgccgtgccggctcgtgcacgcgaaggcgcaa
cgcctggtaccgctgcagatgatcaattacctgctgcagcccgggcacctgttcagtcat
ggccagaacagcaatggctgcgcattgggcagcaccgccgacgaggcggcgctgttcggg
gcgctggaactgatcgaacgcgatgcgttgctgctggcctggtacagccgctccacgcca
ccgcgcttcgtcgccgccaccgtcgatcatgcgccggcacggcagctgtacgcgctactg
caactggcgggctacgacgtgcgctgtttcgacatcacgacggagttcgcgatcccctct
gtgctggtgctgctgctggggagggaagaaggcaggctggccgctttcgtcaccgcggcc
tgccatcccgatccgtgcgaagcgatcgtcgccgcgctgggagaggcccactcgctggtc
ggcgtgtccgagcgcaatctgggccgccaccgccgtcagcatgcgggcggcagcgtggcg
cacctgcgcgacagcgcgcaggcgctgtactacggccaggatggacagcgtcaccacttc
gatttcctcaccgcggcacccgaaacgctggcatggcaggactttgttgccacccacgcg
gggagcgccacgacagcatcgcaagggcccgccgcggcgtggcagatgcttggtgcacgt
gccgccggcgcgggctacgaactggttgtggcggatatcacgccgcctggcctgccgtcc
ctcggcctgcacggcgcacgcgtcttcattccgggcacgctgccgctgacatttggcgac
aagccgctgtgcctcccggcaggtcgcctggcgcgggcggcgctggcctgtgcgtgggtg
aacgccctcgccgacctgaccgaaccgctgctgcatccattgggctga
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