Pseudoduganella plicata: E1742_14555
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Entry
E1742_14555 CDS
T06563
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21825
AraC family transcriptional regulator, L-arginine-responsive activator
Organism
mpli
Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpli03000
]
E1742_14555
Transcription factors [BR:
mpli03000
]
Prokaryotic type
Helix-turn-helix
AraC family
E1742_14555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_Crp_2
DUF92
Crp
Motif
Other DBs
NCBI-ProteinID:
QBQ37260
LinkDB
All DBs
Position
complement(3322929..3323870)
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AA seq
313 aa
AA seq
DB search
MSFADLTRLARGQPLRMLLVNAGEADSLSWAGLVQPLRVAQRLVGHGFELHVRTLAQAIG
ESDEDWHIALLVADEHLPRPLDAPLRAVIGRCRAAGYWGGVGAAVLWLADAGVMGGIRIA
LPWALYADTEEITERAILTPHLFEIDGRHLSCCGGAASIDFALTLIDSLFGAATQAAVKE
TLCIERVRSHDERQRVALQARFGALQPKLSEAVTLMEANIEEPLSTDDIANLVGLSRRQL
ERLFKQYLGSLPSRYYLELRLQRARQLLLETNHSIVQVGLMCGFSSGSHFSTAFGTLFGN
TPREERQRKLAAA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgctgacctgacgcgcctggcgcgcgggcagccgctgcgcatgctgctcgtg
aacgcgggcgaagccgacagcctgtcatgggccggccttgtacaaccgctgcgtgtggcg
cagcgtctggtcggtcacggcttcgagctgcacgtgcgtaccttggcgcaagccatcggc
gagagcgacgaggactggcacatcgcgctgctggtggccgacgaacacctgccgcgcccg
cttgatgcgccgctgcgcgccgttatcgggcgctgccgtgccgccggctattggggcggc
gtcggcgcggccgtgctgtggctggccgacgcgggcgtcatgggcggcatccgcatcgcg
ctgccttgggccctgtacgcggacacggaagagatcaccgagcgcgccatcctgaccccg
cacctgtttgaaatcgacggccgtcacctgagctgctgcggcggcgccgccagcatcgac
ttcgcgctgaccttgatcgacagcctgttcggcgctgccacccaggcggccgtcaaggaa
acgctgtgcatcgaacgggtgcgcagccatgacgagcgccagcgcgtggccctgcaggcc
cgttttggcgcgctgcagccgaagctgtcggaagcggtcacgttaatggaagccaatatc
gaggaaccgctgtcgacggacgacatcgccaacctcgtcggcctgtcgcggcgccagctg
gagcgcctgttcaagcagtacctgggcagcctgccgtcgcggtactacctggagctgcgg
ctgcagcgcgcccgccagctgctgctggaaaccaaccactcgatcgtgcaggtgggcctg
atgtgcggcttctccagcggctcgcatttctccaccgccttcggcacgctgttcggcaac
accccgcgcgaagaacgacagcgcaaactcgccgcagcataa
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