Pseudoduganella plicata: E1742_15310
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Entry
E1742_15310 CDS
T06563
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
mpli
Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpli03000
]
E1742_15310
Transcription factors [BR:
mpli03000
]
Prokaryotic type
Helix-turn-helix
LysR family
E1742_15310
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_29
HTH_28
HTH_23
HTH_8
HTH_IclR
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QBQ37378
LinkDB
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Position
complement(3505506..3506414)
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AA seq
302 aa
AA seq
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MHSRISDDITFRKLEILLAYMEGGNLNAAARMLDISAVSVHRALHSLEDAMSCQLFSLQG
RNLIPNEAAQVLAEVSRDVIRLMADGIAATRSAAGYSADHLKIGSLYSLTTGTIPNVIIG
IKLRKPELETELVLGSNAELLHKLKQNAVDAALMAVPDPDPDVESISLFEDDVFFAAPAG
SPYEHMTEVDLRDCAGEKFVCLRDGFVTFSGFQEAFRIAGFAPTLVTRVGDIFSLMNLVA
AGIGYTLLPGRVRDAFGDKVRLIPLKQDYRMRQTIGLSFLRVRERDPNLLALAAVCRMLK
HS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcacagccggatcagcgacgacatcaccttccgcaaactggaaatcctcctggcctat
atggaaggcggcaacctgaacgcagccgcgcgcatgctcgacatcagcgccgtcagtgtg
caccgggcgctgcattcgctggaggatgcgatgagctgccagctgttcagcctgcagggc
cgcaacctgattcccaacgaggcggcgcaggtgctggccgaggtgagccgcgatgtgatc
cgcctgatggccgacggcattgccgcaacgcgctccgctgccggctattcggccgaccat
cttaaaatcggttcgctgtattcgctgacgaccggcaccattccgaatgtcatcatcggc
atcaaattgcgcaagccggaactggagacggagctggtgctcgggtcgaacgcggagctg
ctgcacaaactgaaacagaatgccgtcgatgcggcgttgatggccgtgccggatcccgat
cccgacgtcgaatcgatttctctgttcgaggacgacgtgttctttgccgcccctgccgga
tcgccctatgagcacatgacggaagtcgacctgcgcgactgcgctggcgagaaattcgtt
tgcctgcgtgacggcttcgttaccttcagcggcttccaggaggccttccgcattgccggt
ttcgcgccgacgctcgtcacccgcgtgggcgacatcttttcgctgatgaaccttgtcgct
gcgggtatcggctacacgctgctgccgggccgcgtgcgcgatgcgtttggcgacaaggtg
cggcttattcccctcaaacaggattaccggatgcgccagacgatcgggctgtcgttcctg
cgcgtgcgcgagcgcgatccgaatctgctggcgttggctgccgtgtgccggatgctcaag
cacagctga
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