Pseudoduganella plicata: E1742_16755
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Entry
E1742_16755 CDS
T06563
Name
(GenBank) DEAD/DEAH box helicase
Organism
mpli
Pseudoduganella plicata
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SNF2_assoc
Motif
Other DBs
NCBI-ProteinID:
QBQ37637
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Position
3821901..3825017
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AA seq
1038 aa
AA seq
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MDLTRDETREVPAAPAAPANPPATQLPYAVATWLQRVDAAAHPKAKLAPTDPDPKQTTYR
LIYVLAPTSGGRHVALCLYKARLRPNGDVAAASPVNEVFSLLSTPPAFLEPGDEDLVRFF
VAMRTGPNSQTGSATEPRGKIGAALLQMLSEQDKLLWANSWADVGNGLVYPMKAGPQRTA
NLAWREEGKGLRLGWKVEAPEGSRNAGADQIDYMLPTEPPWYIDNLSCGVLHLNQGGADI
PLADLQALVAQAPLLMPNDKMRVSQLLLAHGLQQLMPLPQPLPQRLRDDVKPRPILVLDS
AQLADGTAQRWHDYAVLSYDYDGERVSFDPSQRVVRQRGEVTEIIQRDETAEAAALEMLT
GLGFRKPTALPLSSVRGGLLLANQADWIRFAEFGIEQLKAEGWQVEKTSKYRYDMTAVDD
WYAEVEEEGPETGNAWFELELGVTVEQERIPLLPVLVQMIRNMPNDFSPKALALHGETDQ
MLATLPNGKRVALPWQRVKPILTTLGELYFNDKIRHAVRMATLDAARLDELAKSGEFVWT
GGEELRDMGRRLNQFSSVKRIETPAGLQATLRDYQTDGLSWMQFLREYGLAGILADDMGL
GKTVQTLAHILVEKESGRMTQPTLVIAPTSLMGNWQDEAARFAPSLNVLLLQGKDRAELF
DKIPEADLVLTTYALLPRDEEKLREHDFHMVILDESHYIKNTRSKAAQSAGLLRTKHRLC
LSGTPLENHLGELWSQFHFLLPGLLGDEKSFNSQFRHPIERQDDPVRRMLLNRRIKPFLL
RRTKDSVAKELPPKTEMVRRVELTGGQRDLYETVRLAMDQKVREEIDRKGVARSQIVILE
ALLKLRQVCCDPRLVKTLSPRKQQAAGSAKLTDLMQMLEDLLEEDRKILVFSQFTSMLEL
IEEELEARDIPYALLTGETRDRGAQVAAFQQGAVPIFLISLKAGGVGLNLTAADTVIHYD
PWWNPAAENQATDRAWRIGQDKPVFVYKLIAKGTLEEKIQVLQQKKADLANSVLAEGESQ
KMALTQEDLQQIFAPLAD
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggatttgacccgcgacgaaacccgcgaagttcccgctgctcccgctgccccggccaac
ccgccggcgacgcagctgccctatgccgtggccacgtggctgcagcgcgttgacgcagcc
gcgcatccgaaggcgaagcttgctcccaccgatcccgacccgaagcagaccacgtaccgg
ctgatctatgtgctggccccgacgtccggtggccggcacgtggcgctgtgcctgtacaag
gcgcgcctgaggccgaacggcgacgtggcggcagccagtcccgtcaacgaagtgttctcg
ctgctgtccacgccgcccgcgttcctggagccgggcgacgaggatctggtccgattcttt
gttgccatgcgcacagggccgaactcgcagacgggcagcgcgaccgaaccgcgaggcaag
atcggcgccgccctgctgcaaatgctgtcagaacaggataagttgctgtgggcaaattcc
tgggcggacgttggcaatggcctcgtctatccgatgaaggcgggcccccaacgcacggcc
aacctggcctggcgcgaagagggcaaggggttgcgcctgggctggaaagtcgaggcgccg
gaaggcagccgcaacgctggggctgaccagatcgactacatgctgccgaccgaaccgccg
tggtatatcgacaatctgtcctgcggcgtactgcacctgaaccagggcggtgcggatatt
ccgctggccgacctgcaggcactggtcgcgcaagcgccattgctgatgccgaacgacaag
atgcgcgtgtcgcaactgctgctggcccatggcctgcaacagctgatgccactgcctcag
ccgttgccgcagcgtctgcgcgacgacgtcaagccgcgcccgatcctcgtgctcgactcg
gcccagctggccgatggcacggcgcagcgctggcacgattacgccgtgctgtcctacgac
tacgatggcgagcgggtatcgttcgacccatcgcagcgcgtcgtgcgccagcgcggcgaa
gtgacggaaatcatccagcgcgacgagacggccgaagccgccgcgctggaaatgctgacg
ggcctcggtttccgcaagccaacggcattgccgctctccagcgtgcgcggcggcttgctg
ctggccaaccaggcggactggatccgttttgccgagttcggtatcgagcagctgaaagcc
gaaggctggcaggtcgagaaaacgtcgaaataccgttatgacatgacggcggtggacgac
tggtatgccgaagtcgaggaagagggcccggaaacgggcaacgcgtggttcgagctggag
ctgggcgtcaccgtcgagcaggaacgtattccgctgttgccggtgctggtgcagatgatc
cgcaatatgcccaacgacttcagtccgaaagcgctggccctgcatggcgagacggaccag
atgctggccacgttaccgaacggcaagcgcgtggcgctgccgtggcagcgggtcaagccg
attctgacgaccttgggcgaactgtatttcaacgacaagatccgccatgccgtgcgcatg
gccaccctggacgcggcgcgcttggacgagctggccaagagcggcgagttcgtctggacc
ggcggcgaagaactgcgcgacatgggccgccgcctgaaccagttctcgtccgtcaaacgc
atcgagacgccggccggcctgcaggccacgctgcgcgactaccagaccgacggtctgtcg
tggatgcaattcctgcgcgaatacggcctggccggcattctggccgacgacatgggcctc
ggtaaaacggtgcagacgctggcccacattctggtcgaaaaggagtcgggacggatgacg
cagccgacgctcgtcatcgcgcctaccagcctgatgggtaactggcaggacgaggcggcg
cggttcgcaccaagcctgaatgtgctgctgctgcagggcaaggatcgcgccgagctgttc
gacaagattccggaggcggacctggtgctgacgacgtatgcattgctgccccgtgacgag
gaaaagctgcgcgagcacgatttccacatggtcatcctggacgaatcgcactacatcaag
aacacccgctcgaaagccgcccagagcgccggcctgctgcgcacgaaacatcggctgtgc
ctgtccggcacgccgttggaaaaccacctgggcgagttgtggtcgcaattccacttcctg
ctgccgggcctgctgggcgacgaaaaatcgttcaattcgcagttccgtcacccgatcgaa
cgccaggacgaccccgtgcgccgcatgctgctgaaccgccgcatcaagccgttcctgctg
cgccgtaccaaggacagcgtggcgaaggaactgccgcccaagacggaaatggtgcgccgc
gtggaactgacgggcggccagcgcgacctgtacgaaaccgtacgcctggcgatggaccag
aaagtgcgcgaggaaatcgaccgcaagggcgtggcgcgcagccagatcgtcatcctcgag
gcactgctgaagctgcgccaggtgtgctgcgatccgcgcctagtcaagacgttgtcgcca
cgcaagcagcaggcagcaggctcggcaaagctgacggacctgatgcagatgctggaagac
ctgctggaagaagatcgcaagattcttgtgttctcgcagttcacgtcgatgctggaactg
atcgaggaagagctggaagcgcgcgacatcccgtacgcgctgctgacgggcgagacccgc
gaccgcggcgcgcaggtggccgcgttccagcagggcgccgtgccgatcttcctgatcagc
ctgaaggcgggtggtgtcggcctgaacctgacagccgccgataccgtcatccactacgac
ccgtggtggaatccggcggcagaaaaccaggcaacggaccgcgcctggcgcatcgggcag
gataaacccgtgtttgtctataaattgattgccaagggcacgctggaagagaaaatccag
gtgctgcagcagaagaaggccgatctggccaattccgtgctggccgaaggcgaatcgcag
aagatggcgctgacgcaggaagacctgcagcagatctttgcccccctggcggactga
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