KEGG   Pseudoduganella plicata: E1742_16990
Entry
E1742_16990       CDS       T06563                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
mpli  Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:mpli00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpli03400]
    E1742_16990
Enzymes [BR:mpli01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     E1742_16990
DNA repair and recombination proteins [BR:mpli03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    E1742_16990
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 AAA_12 FbpC_C_terminal
Other DBs
NCBI-ProteinID: QBQ37681
LinkDB
Position
3878325..3880397
AA seq 690 aa
MSNAPQFGLNGPQSEAVLYLDGPALVLAGAGSGKTRVITQKITYMIEDRGYDPRTIAALT
FTNKAALEMQERVAKLLKQPRQAKLLTVSTFHSLGVKILRQEANHLGLKDRFSIMDSDDC
YSLVQDLAITTDKQLIRRIQNDISLWKNGLVVPELALRNAKDEDEAQSARIYASYVATLS
SYQAVDFDDLIRLPVELFRDNETVRDKWQRRLRYLLVDEYQDTNTCQYELLKLMVTGLGK
KPMFTAVGDDDQAIYAWRGASVENLANLQVDFPDLKLIKLEQNYRSTTRILQAANAVISN
NPKLFEKALWSEHGLGEPIKVHAMANDEQEADQVAIMISADHFERKNKWSDYAILYRGNH
QARVIEQALRNQRIPYTISGGQSFFDKAEIKDIIAYLRLLANQDDDPAFIRAVTTPRRGI
GQSTLEVLGAFSGQWQCSLFEAVFKGGIEAKLTDRQLMPLRDFCNFINDLESRASRPGPS
GSGDNAAQVLDDLMEAIHYEHYLYDTLEERAAQSRWQNVLDFVSWLKDRGRGGKDRDGEE
KNVLELTQMVALMSMLEGKDEDPDAIRMSTLHASKGLEYPHVFLVGVEEGILPHKGDPDA
PVETLAQRIEEERRLMYVGITRAKRTLQLTWCKKRKRGGEHVHCDVSRFIAEMQLDVGDA
VPKETEVISPRERLARMKELLATPKTKEVT
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgtccaatgcaccacaattcggcctgaacggtccgcaaagcgaagccgtgctctatctc
gacggacccgccctcgtgctggccggggcgggctcgggcaagacgcgtgtcatcacgcag
aagatcacctacatgatcgaggaccgcggctacgatccgcgcacgatcgccgcgctgacg
ttcaccaacaaggccgcgctcgagatgcaggaacgcgttgccaagctgctgaaacagccg
cgccaggccaagctgctgacggtgtcgacgttccattcgctgggcgtcaagatcctgcgc
caggaagcgaatcacctggggctgaaggaccgcttctccatcatggacagcgacgactgc
tattcgctggtgcaggacctcgccatcacgacggacaagcagctgatccgccgcatccag
aacgacatctcgctgtggaaaaacggcctggtggtgcccgagctggcgctgcgcaacgcg
aaggacgaggatgaagcgcaatcggcccgcatttacgccagttacgtggccaccttgtcg
tcctaccaggcggtggacttcgacgacctgatccgcctgcccgtggagctgttccgcgac
aacgagacggtgcgcgacaagtggcagcgccgcctgcgctacctgctggtcgacgaatac
caggacaccaatacctgccagtacgagctgctcaagctgatggtgacgggcctgggcaag
aagccgatgtttacggccgtgggcgacgacgaccaggccatctacgcatggcgcggcgcg
tcggtggagaacctggccaacctgcaggtggatttccccgacctgaagctgatcaagctg
gagcagaactaccgctccaccacgcgcatcctgcaggcggccaatgccgtcatctcgaac
aatccgaaactgttcgagaaggcgctgtggtccgagcatggcctgggcgagcccatcaag
gtgcatgcgatggccaacgacgagcaggaggccgaccaggtcgcgatcatgatctcggcg
gaccacttcgagcgcaagaataaatggtcggattacgcgatcctgtaccgtggcaaccac
caggctcgcgtgatcgagcaggcgctgcgcaaccagcgcattccatacacgatctccggt
ggccagagctttttcgataaagccgagatcaaggacatcatcgcctacctgcgcctgctg
gcgaaccaggatgacgatcccgcattcatccgcgccgtgacgacgccgcgccggggcatc
ggccagtcgacattggaagtgctgggcgccttttcgggccagtggcagtgctcgctgttc
gaagccgtcttcaagggcggcatcgaagcgaagctgacggatcgccagttgatgccgctg
cgtgacttctgcaatttcatcaatgacctggaatcgcgcgccagccgccccgggccgtcc
ggcagcggcgacaacgcggcgcaggtgctggacgacctgatggaagccatccactacgag
cactacctgtatgacaccctggaagagcgcgccgcgcaaagccgctggcagaacgtgctg
gattttgtctcgtggctgaaggaccggggccgcggcggcaaggatcgcgacggcgaagag
aaaaatgtgctggagctgacgcagatggtggcgttgatgtccatgctggaaggcaaggac
gaggacccggacgcgatccgcatgtcgacgctgcacgcgtcgaaagggctggaatatccg
catgtgttcctggtcggcgtggaagagggcatcctgccgcacaagggcgatccggatgcg
cccgtcgagacgctggcccagcgcatcgaggaagagcgccgcctgatgtacgtgggcatt
acccgcgccaagcgcacgctgcagctgacgtggtgcaagaagcgaaaacgcggcggcgag
cacgtgcattgcgacgtgtcgcgcttcatcgccgagatgcagctggacgtgggcgacgcc
gtgccgaaggaaaccgaagtcatcagtccgcgcgaacgcctggcgcgcatgaaggaactg
ctggccaccccgaaaacgaaggaagtaacgtga

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