Pseudoduganella plicata: E1742_17240
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Entry
E1742_17240 CDS
T06563
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
mpli
Pseudoduganella plicata
Pathway
mpli03030
DNA replication
mpli03430
Mismatch repair
mpli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E1742_17240 (ssb)
03430 Mismatch repair
E1742_17240 (ssb)
03440 Homologous recombination
E1742_17240 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpli03032
]
E1742_17240 (ssb)
03400 DNA repair and recombination proteins [BR:
mpli03400
]
E1742_17240 (ssb)
03029 Mitochondrial biogenesis [BR:
mpli03029
]
E1742_17240 (ssb)
DNA replication proteins [BR:
mpli03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E1742_17240 (ssb)
DNA repair and recombination proteins [BR:
mpli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
E1742_17240 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
E1742_17240 (ssb)
Mitochondrial biogenesis [BR:
mpli03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
E1742_17240 (ssb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSB
OSB_SSB
SSB_1
YorF
tRNA_anti-codon
DUF3127
DUF5342
Motif
Other DBs
NCBI-ProteinID:
QBQ37720
UniProt:
A0A4P7BHE5
LinkDB
All DBs
Position
3940635..3941153
Genome browser
AA seq
172 aa
AA seq
DB search
MASVNKVIIVGNLGRDPEIRYMPSGDAIANIAVATSFRSKDKNTGEQKEVTEWHRISFFG
RLAEIVGQYLKKGSSVYVEGRLQTRKYTDKDGVEKYATDIIAQEMQMLGGRQGMGGEGGM
GMGGGDEMGMGGGGYDAPPSRPAPRPQQSAPAPRPAPKPAPNFSDMDDDIPF
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtcaataaagtcatcatcgtcggcaacctgggccgcgacccggagatccgc
tacatgccgagcggcgatgccatcgccaatattgccgttgccacgtcgttccgcagcaag
gacaagaacacgggcgagcagaaggaagtgacggaatggcaccgcatctcgttcttcggc
cgcctggccgagatcgtcggccagtacctcaagaagggctcgtccgtctacgtcgaaggc
cgcctgcagacgcgcaagtacaccgacaaggacggcgttgagaagtacgcaaccgacatt
atcgcgcaggaaatgcagatgctgggcggccgccagggcatgggcggcgaaggcggcatg
ggcatgggtggcggcgacgagatgggcatgggcggtggcggctacgacgcacctcctagc
cgtccggcgccacgtccgcagcagtcggccccggcaccacgcccggcaccgaagccggcg
ccgaacttctcggatatggatgacgatattccgttctga
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integrated database retrieval system
