Pseudoduganella plicata: E1742_18000
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Entry
E1742_18000 CDS
T06563
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mpli
Pseudoduganella plicata
Pathway
mpli00300
Lysine biosynthesis
mpli00470
D-Amino acid metabolism
mpli01100
Metabolic pathways
mpli01110
Biosynthesis of secondary metabolites
mpli01120
Microbial metabolism in diverse environments
mpli01230
Biosynthesis of amino acids
Module
mpli_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E1742_18000 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E1742_18000 (dapF)
Enzymes [BR:
mpli01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
E1742_18000 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
PmbA_TldD_2nd
Hexokinase_2
Motif
Other DBs
NCBI-ProteinID:
QBQ37858
UniProt:
A0A4V1AU42
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Position
complement(4103503..4104375)
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AA seq
290 aa
AA seq
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MKLKFTKMHGAGNDFVVIDAINQQVDFSPAQWQALADRRFGVGADQMLVVEKSTQAGCDF
RYRIFNSDGGEVEQCGNGARAFVKFVAEKGLTDRRSIAVETMSGVISPRLEDDGSVTVDM
GAPVLEPALVPFDTEGLQGQPEGRDTLWPLMLELGGEKETVLVSVLSMGNPHAVQVVADT
ETAPVELTGPLIEHHPHFPKRVNAGFMQIVDRGHIRLRVFERGAGETLACGTGACAAVVA
GIRRGLLDSPVRVDARGGQLSIAWAGEGQPVYLTGPAVTVFEGEIELAIN
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaattcaccaagatgcatggcgcgggcaacgacttcgttgtgatcgacgcc
atcaaccagcaggtcgacttctcgccggcgcagtggcaggcgctggccgaccgccgcttc
ggggtgggcgccgaccagatgctggtcgttgaaaagtccacccaggccggctgcgacttc
cgctaccgcatcttcaacagcgacggcggcgaggtcgagcagtgcggcaacggcgcccgc
gccttcgtcaagttcgtcgcggagaaggggctgaccgaccggcgcagcatcgccgtcgag
acgatgtccggcgtcatctcgccacgtctggaagacgatggcagcgttacggtggacatg
ggcgcgcccgtcctggaacccgcactggtgccgttcgatacggagggtctgcagggccag
ccggaagggcgcgatacgctgtggccgctgatgctggagctgggcggagaaaaggaaacc
gtgctggtgtcggtgctgtcgatgggcaatccgcatgccgtgcaggtcgtggccgacacg
gagacggcacccgtcgaactgaccggtccgctgatcgagcatcatccccattttccgaaa
cgggtcaatgccggcttcatgcagattgtcgaccgcgggcacatccggctgcgcgtgttc
gaacggggcgccggcgaaacgctggcttgcggcacgggcgcatgcgcggccgtggtggcc
ggcatccgccgcggcctgctcgattcgcccgtgcgcgtcgatgcgcgcggcggccagctg
tcgatcgcctgggccggcgaaggccagcctgtctatctgacgggccctgcggtgacggtt
tttgaaggcgagatcgagctggcgatcaactga
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