Pseudoduganella plicata: E1742_18675
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Entry
E1742_18675 CDS
T06563
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mpli
Pseudoduganella plicata
Pathway
mpli00300
Lysine biosynthesis
mpli00470
D-Amino acid metabolism
mpli01100
Metabolic pathways
mpli01110
Biosynthesis of secondary metabolites
mpli01120
Microbial metabolism in diverse environments
mpli01230
Biosynthesis of amino acids
Module
mpli_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E1742_18675 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E1742_18675 (lysA)
Enzymes [BR:
mpli01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
E1742_18675 (lysA)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QBQ37984
UniProt:
A0A4P7BGX0
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All DBs
Position
complement(4248130..4249404)
Genome browser
AA seq
424 aa
AA seq
DB search
MSQFDYQNGVLRAEGVALPIIAETFGTPTYVYSKAQLLENFDAYANACAGRDALVCYAMK
ANSNLAILDLLARRGAGFDIVSGGELLRVIAAGGDPKKVIFSGVGKSVDEMRLALQHDIL
CFNVESIPELHRLNEVAGALGKKARVSLRVNPNVDPKTHPYIATGLKASKFGVAFSDALD
TYRMAAQLPHLDVAGIDCHIGSQLLDDTPLLEALDRLIELIDALAAEGIHLHHLDVGGGL
GIDYGVAGEEAPAHAGDYVTRVFQRVEAWRAEKHGGKAIKVIFEPGRSIVGNTGVLLTKV
EFIKYGEEKNFCIVDAAMNDMARPALYQAWMDMQPVKQATGGATFDVVGPICESGDWLAR
DRALAVEAGDLLVMKTAGAYGMTMASNYNTRGRAAEVIVDGDQVHLVRRRETPEELFALE
SLIR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaattcgattatcagaacggtgtcctgcgcgccgaaggtgtcgccctgcctatc
atcgccgagacgttcggtacgccgacgtatgtgtactccaaagcccagctgctcgagaac
ttcgatgcctacgccaacgcctgcgccggccgcgacgcgctggtgtgctacgcgatgaag
gccaactcgaacctggccatcctcgacctgctggcgcggcgcggtgccggcttcgacatc
gtttccggcggcgagctgctgcgcgtgatcgccgccggcggcgacccgaagaaagtcatc
ttctccggcgtgggcaagagcgtcgacgagatgcgtctggcgctgcagcacgatatcctg
tgcttcaacgtcgagtcgattcccgaactgcaccgtctcaatgaagtggccggcgcgctg
ggcaagaaggcgcgcgtgtcgctgcgcgtcaatccgaacgtggatccgaagacccaccct
tacatcgccactggcctgaaagccagcaaattcggcgtcgcgttcagcgatgcgctggac
acctaccgcatggcggcgcagctgccgcacctggacgtggcgggcatcgactgccatatc
ggctcgcagctgctggacgacacgccgctgctggaagcactggaccgcctgatcgaactg
atcgacgctctggcggccgagggcatccacctgcatcacctggacgtgggcggcggcctg
gggatcgattacggcgtggccggcgaggaagcgcccgcgcacgcaggcgactacgtgacg
cgcgtgttccagcgcgtcgaggcatggcgcgccgaaaagcacggcggcaaggcgatcaag
gtgattttcgagccgggccgctccatcgtcggcaacacgggcgtgctgctgacgaaagtg
gaattcatcaagtacggcgaagagaagaacttctgcatcgtcgacgcggccatgaacgac
atggcgcggcccgcgctgtaccaggcctggatggacatgcagcccgtgaagcaggcgacg
ggcggcgccacgttcgacgtcgtcggccccatctgcgaatcgggcgactggctggcgcgc
gaccgcgccctcgccgtggaagcgggcgacctgctcgtcatgaagacggcgggcgcctac
ggcatgacgatggcctcgaactacaacacgcgcggccgcgccgccgaagtcatcgtcgac
ggcgaccaggtgcacctggtgcgccgccgcgaaacgccggaagagctgttcgcgctggag
tcactgatccgctaa
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