Pseudoduganella plicata: E1742_18950
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Entry
E1742_18950 CDS
T06563
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
mpli
Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpli03019
]
E1742_18950 (rapZ)
Messenger RNA biogenesis [BR:
mpli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E1742_18950 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_16
AAA_22
AAA_18
FtsK_SpoIIIE
CoaE
AAA_29
DUF61
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QBQ38031
UniProt:
A0A4P7BGX2
LinkDB
All DBs
Position
complement(4302433..4303296)
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AA seq
287 aa
AA seq
DB search
MRIVLITGISGSGKSVALNVLEDTGYYCVDNLPPALLASLVGTLCEEGTQALAVAVDARS
AASLATLPGDIRKLKDLGHDVKVMFLTANTHSLVARFSETRRSHPLSHELHPGQNPAARR
TLIECIQEERERLSAIEQLGHVIDTSELSANKLRGWIKDLVESENAPLTLFFESFAFKVG
VPQDADYVFDVRAIPNPYYDLTLRPLNGRDAPVIAFLDAQPSAEEMFRDIRAFIEKWLPS
FKKDNRSYLTVAIGCTGGQHRSVYMAERLAQYFNGAERVVLRHREQA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgtcctcattaccggaatatccggctcgggcaaatcggttgccctgaacgtt
ctcgaagacaccggctactattgcgtagacaacctgccgcctgcgctgcttgccagtctc
gtgggcacgctgtgcgaagaaggcacgcaggcgctggctgtcgctgtcgatgcgcgcagc
gccgcgtcgctggccacgctgccgggcgatatccgcaaactcaaggatctgggacacgac
gtgaaggtgatgttcctgacggcgaacacgcactcgctggtggcgcgcttttccgaaacg
cggcgcagccatccgctgtcgcacgaacttcacccgggtcagaaccccgccgcccgtcgc
acgctgatcgaatgcatccaggaggagcgcgagcgcctctcggccatcgagcagctggga
cacgtgatcgacacgtccgaactctcggccaacaagctgcgcggctggatcaaggatctg
gtcgaaagcgagaacgcgccactgacgctgttcttcgaatcgttcgccttcaaggttggc
gtgccgcaggacgcggactacgtgttcgacgtgcgggcgattccgaacccgtattacgat
ctgaccttgcggccgctgaacggccgcgatgcgcctgtgattgccttcctcgatgcgcaa
ccgagcgcggaagagatgttccgcgacatccgcgcgttcatcgagaagtggctgccgtcg
ttcaagaaggacaaccgcagctacctgaccgtggccatcggctgcacaggcggccagcac
cgctcggtgtacatggccgaacggctggcgcagtatttcaacggcgccgaacgcgtcgtg
ctgcggcaccgcgagcaggcctga
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