Pseudoduganella plicata: E1742_20150
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Entry
E1742_20150 CDS
T06563
Name
(GenBank) arginine--tRNA ligase
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
mpli
Pseudoduganella plicata
Pathway
mpli00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E1742_20150
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mpli01007
]
E1742_20150
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpli03016
]
E1742_20150
03029 Mitochondrial biogenesis [BR:
mpli03029
]
E1742_20150
Enzymes [BR:
mpli01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
E1742_20150
Amino acid related enzymes [BR:
mpli01007
]
Aminoacyl-tRNA synthetase
Class I (G)
E1742_20150
Transfer RNA biogenesis [BR:
mpli03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
E1742_20150
Prokaryotic type
Other AARSs
E1742_20150
Mitochondrial biogenesis [BR:
mpli03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
E1742_20150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1d
tRNA-synt_1
NCOA6_TRADD-N
PL28
Motif
Other DBs
NCBI-ProteinID:
QBQ38226
UniProt:
A0A4P7BHD3
LinkDB
All DBs
Position
complement(4557428..4559140)
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AA seq
570 aa
AA seq
DB search
MLAQQKQQIVDLFQAALAPILAGSGLSPNVVLERPRDAAHGDVACNIAMQLAKQLKMNPR
ELAQKVVAALLENPAGKDLIASADIAGPGFINLRVTDASKQAVVKTVLAQGAAYGRSNAG
TGKQVILEFVSANPTGPLHVGHGRQAALGDALSSLFEAQGFDVTREYYYNDAGVQIQTLA
TSVQARARGIKPGDAAWPESAYNGDYIQDIADDFLARKTVAASDGVPATASGDVDDFESI
RAFAVAYLRCEQDTDLQAFGVKFDNYYLESSLYTDGKVEAAVSALVANGHTYEEGDALWL
RTTDYGDDKDRVMRKKDGTYTYFVPDVAYHIVKFQRGFTQAINIQGSDHHGTIARVRAGL
QAVNMGIPQGYPDYVLHKMVTVMKNGAEVKISKRAGSYVTVRDLIEWSGGGDITKGRDAV
RFFLISRKADTEFVFDVDVALATNDENPVYYVQYAHARICSALANWGGDEATLAGVDLSP
LTTPHEAGLLAKLAAYPEMLQRAQSELGPHQVAFYLRELAGELHSYYFAHKWLLDDDEPL
KLARLALAVAVRQVLRNGLALIGVSAPNQM
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcccaacaaaaacaacagatcgtcgacctgttccaggccgccctcgcccccatc
ctcgccggatcgggtctttcccccaatgtggtgctggagcgtccgcgcgatgccgcccac
ggcgacgtcgcctgcaatatcgccatgcagctggccaagcagctcaagatgaacccgcgc
gaactggcgcagaaggtcgttgccgcgctgctggaaaatccggccggcaaggacctgatc
gccagcgccgacatcgccggtccgggcttcatcaacctgcgcgtcacggacgcgtccaag
caggccgtcgtgaagacggtgctggcacagggcgccgcgtatggccgcagcaatgccggc
accggcaagcaagtgatcctcgaattcgtctcggccaacccgaccggcccgctgcacgtg
ggccacggccgccaggcggcgctgggcgatgcgctgtcgtcgctgttcgaggcgcagggc
ttcgacgtcacgcgcgaatactattacaacgatgcgggcgtgcagatccagacgctggcc
acctcggtacaggcgcgcgcacgcggcatcaagccgggcgacgccgcatggccggaatcg
gcctacaacggcgactacatccaggacatcgcggacgacttcctggccaggaaaaccgtg
gccgcgagcgatggcgtacccgccacggcttccggcgacgtcgacgacttcgaatcgatc
cgtgcgtttgccgtcgcctacctgcgctgcgagcaggacaccgacctgcaggcgttcggc
gtcaagttcgacaactactatctcgagtcttcgctgtacacggacggcaaggtcgaagca
gccgtcagcgcgctggtcgccaacggccacacgtacgaagaaggcgatgccctgtggctg
cgtacgaccgactacggcgacgacaaggaccgggtgatgcgcaagaaggacggcacgtac
acgtacttcgtgccggacgtggcgtaccatatcgtcaagttccagcgcggcttcacgcag
gcgatcaatatccagggctccgaccaccacggcaccatcgcgcgcgtgcgcgccggcctg
caggcggtgaacatgggcatcccgcagggttatcccgactacgtgctgcacaagatggtc
accgtcatgaagaacggcgccgaagtgaagatttccaagcgtgccggctcgtacgtgacg
gtgcgcgacctgatcgaatggtccggcggcggcgatatcaccaagggccgcgatgccgtg
cgcttcttcctgatttcccgtaaagccgatacggagttcgtgttcgacgtggacgtggcc
ctggccaccaatgacgagaacccggtctactacgtccagtatgcgcacgcgcgcatctgc
tcggccctcgccaactggggaggcgacgaagccacgctggccggggtcgacctgtcgccg
ctgacgacgccgcacgaagcggggctgctggccaagctggccgcctatcctgaaatgctg
caacgcgcccagagcgagctcgggccgcaccaggtcgcgttctacctgcgcgagctggcc
ggtgagctgcacagctactacttcgcgcacaagtggctgctggacgacgacgagccgctg
aagctggcccgtctggcattggccgtcgccgtgcgccaggtgctgcgcaacggcctcgcc
ctgatcggcgtttccgcgcccaaccagatgtaa
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