Pseudoduganella plicata: E1742_20400
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Entry
E1742_20400 CDS
T06563
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
mpli
Pseudoduganella plicata
Pathway
mpli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E1742_20400 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpli03400
]
E1742_20400 (ruvA)
DNA repair and recombination proteins [BR:
mpli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E1742_20400 (ruvA)
RecFOR pathway proteins
E1742_20400 (ruvA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
IMS_HHH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QBQ38270
UniProt:
A0A4P7BIP4
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All DBs
Position
4611812..4612393
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AA seq
193 aa
AA seq
DB search
MIGRLSGILLEKNPPQLLVDVQGVGYEVDVPMSTFYNLPHTGERVTLFTHQAIREDAHLL
FGFGNAEERAVFRQLIKITGVGARTALSILSGMSIADLSQAVTRQEAGRLIKVPGIGKKT
AERLLLELKGKLGADLGVVGGAPAVPDAQTDVLNALIALGYSDKEALLALKAVPAGASVS
DGIKAALKALSKG
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgatcggacgtctctccggcatcctgctcgaaaaaaatccgccgcaactgctggtcgac
gtgcagggcgtcggctatgaagtcgatgtgccgatgagcaccttctacaatctgccgcac
acgggcgagcgcgtcacgctgttcacgcaccaggccatccgcgaggatgcgcacctgctg
ttcggcttcggcaatgccgaggagcgggccgtgttccgccagctgatcaagatcacgggc
gtgggcgcgaggacggcgctgtcgatcctgtcgggcatgtcgatcgcggacctgtcgcag
gccgtcacgcggcaggaagcgggacgcctgatcaaggtgcccggcatcggcaagaagacg
gccgaacgcctgctgctggagctgaagggcaagctgggcgcggacctgggcgtcgtcggc
ggtgcccctgctgtgccggatgcgcaaacggacgtcctgaacgcgctgatcgctttgggg
tattctgacaaggaggcgctgctggcgctgaaggccgtgccggccggcgcgagcgtctcg
gacggtatcaaggcggcgctcaaggccctgtccaaaggttaa
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