KEGG   Pseudoduganella plicata: E1742_20495
Entry
E1742_20495       CDS       T06563                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
mpli  Pseudoduganella plicata
Pathway
mpli03420  Nucleotide excision repair
mpli03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mpli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    E1742_20495
   03430 Mismatch repair
    E1742_20495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpli03400]
    E1742_20495
Enzymes [BR:mpli01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     E1742_20495
DNA repair and recombination proteins [BR:mpli03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     E1742_20495
   MMR (mismatch excision repair)
    Other MMR factors
     E1742_20495
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_12 Viral_helicase1 AAA_30 DUF6525
Other DBs
NCBI-ProteinID: QBQ38288
UniProt: A0A4V1AU85
LinkDB
Position
complement(4630765..4633071)
AA seq 768 aa
MQNLLQNLNPEQLAAVTLPPQNALILAGAGSGKTRVLTTRIAWLIQTGQVSPAGILAVTF
TNKAAKEMLTRLSAMLPINTRGMWIGTFHGLCNRLLRTHYRDAALPQSFQILDSQDQLSM
IKRLLKAQNVDDEKYPPKTVMYFINNHKDQGLRAGQIDAYDAIERKLVELYALYDDQCQR
EGVVDFAELLLRTYELLTRNQPLREHYQQRFRHILVDEFQDTNNLQYNWLKLLAGHGTGG
GGALFAVGDDDQSIYAFRGANVGNMSAFEAEFNVQNLIKLEQNYRSHGHILDAANMLIAN
NSKRLGKNLRTDAGHGEQVRVYEASSDLQEAQWIIEEAKNLIAEGASRSEIAVLYRSNAQ
SRVIEHALFSAGIPYHVYGGLRYFQRAEVKHAIAYLQLMDNPHNDSAFLRVVNFPARGIG
ARTLEQLQNAAESYGISLYAAVPYMVGKAGTSLGGFVKLVEGVRFETQQMALPELVRITL
ESSGLLAHYATEKEGADRIENLEQMVNAATQFVSEEGYGQGAPAHLGPQADAQAGEAIVN
ADGVEILDADAPLATVMSPLSAFLSHASLEAGDNQAQAGQEALQLMTVHSAKGLEFDNVF
ITGLEEGLFPHESSSKEDGGVEEERRLMYVAITRARKRLYMCFSQTRMLHGQTRYNMKSR
FFDELPEEALKWLSPRVQSHWFANKKATWEDAKLSGGSDNAIAQRIAQQKTGGSGWRIGE
SVVHAKFGEGVIVNIEGSGSNCRAQINFGSAGMKVLDLSVAKLERLGR
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgcaaaatctcctccagaatctcaatcccgaacaacttgccgccgtcaccctgccaccg
cagaacgccctgattctggcgggcgccgggtcgggcaaaacgcgtgtgctgaccacgcgc
atcgcgtggctgatccagacgggccaggtctcgccggccggcatcctggctgtcacgttc
accaacaaggcggcaaaggagatgctgacgcgtctgtcggcgatgttgccaatcaataca
cgcggcatgtggatcggcacgttccacggcctgtgcaaccgcctgctgcgcacccattac
cgcgacgcggccctgccgcagtcgttccagatcctcgactcgcaggaccagctgtcgatg
atcaagcgcttgctgaaggcgcagaatgtcgatgatgagaagtacccgccgaagacggtc
atgtacttcatcaacaaccacaaggaccagggcctgcgcgccgggcaaatcgacgcttac
gacgcgatcgagcgcaagctggtggaactgtacgcactgtacgacgaccagtgccagcgc
gaaggcgtcgtcgatttcgccgaactgctgctgcgcacctatgaactgctgacgcgcaac
cagccgctgcgcgaacactatcagcagcgcttccgccatatcctcgtcgacgagttccag
gatacgaacaacctgcagtacaactggctgaaactgctggccggccacggcacgggaggc
ggcggcgcgctgtttgccgtgggcgacgacgaccagagcatctacgcgttccgtggtgcg
aatgtcggcaacatgtccgcgttcgaggccgagttcaatgtgcagaacctgatcaagctg
gaacagaactaccgctcgcacggccacatcctcgatgcggccaatatgctgatcgccaat
aacagcaagcgcctgggcaagaacctgcgcacggacgcgggccacggcgagcaggtgcgc
gtctacgaagccagctcggacctgcaggaagcgcagtggatcatcgaggaagcgaagaac
ctgatcgccgaaggcgcctcgcgcagcgagatcgcggtgctgtaccgctccaacgcgcag
tcgcgcgtgatcgagcatgcgctgttctcggccggcattccgtaccacgtgtacggcggc
ctgcgctacttccagcgcgccgaggtgaagcacgccatcgcgtacctgcagctgatggac
aacccgcacaacgactcggccttcctgcgcgtggtgaatttcccggcgcgcggcatcggt
gcgcgcacgctggagcagctgcaaaacgccgccgagtcgtacggcatctcgctgtatgcc
gccgtgccctacatggtcggcaaggccggcacgtcgcttggcggcttcgtcaagctggtc
gaaggcgtgcggtttgaaacgcagcagatggcgctgccggaactggtgcgcatcacgctg
gagtcatccggcctgctggcgcactacgccaccgagaaggagggcgcggaccgcatcgaa
aacctggagcagatggtcaacgcggccacgcagttcgtctccgaggaaggctacgggcaa
ggcgccccggctcacctgggcccgcaggccgatgcgcaggcgggcgaggcgatcgtcaat
gccgacggcgtcgaaatcctcgatgccgatgcgccgctggcaaccgtgatgtcgccgctc
tccgcgttcctgtcgcacgcgtcgctggaggcgggcgacaaccaggcgcaggccggccag
gaagcgctgcagctgatgacggtgcactcggccaagggcctggaattcgacaacgtcttc
atcacgggcctggaggaaggcctgttcccgcacgagagcagctcgaaggaagacggcggc
gtggaggaagaacgccgcctgatgtacgtggcgatcacacgggcgagaaagcgcctgtac
atgtgcttctcgcagacgcgcatgctgcacggccagacgcgctacaacatgaagtcgcgc
ttcttcgacgagctgccggaggaagcgctgaaatggctgtcgccgcgcgtacagagccac
tggttcgccaacaagaaggcgacgtgggaggatgccaaactgtccggcgggtcggacaac
gccatcgcccagcgcatcgcgcagcaaaagacgggcggctccggctggcgcatcggcgag
tccgtcgttcacgcaaaattcggcgagggcgtcatcgtcaatatcgaaggcagcggcagc
aactgccgggcccagatcaatttcggcagtgccgggatgaaggtgctggatctttcggtg
gcgaagctggagcggctggggcgctaa

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