KEGG   Pseudoduganella plicata: E1742_20515
Entry
E1742_20515       CDS       T06563                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mpli  Pseudoduganella plicata
Pathway
mpli03030  DNA replication
mpli03410  Base excision repair
mpli03420  Nucleotide excision repair
mpli03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mpli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    E1742_20515 (polA)
   03410 Base excision repair
    E1742_20515 (polA)
   03420 Nucleotide excision repair
    E1742_20515 (polA)
   03440 Homologous recombination
    E1742_20515 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpli03032]
    E1742_20515 (polA)
   03400 DNA repair and recombination proteins [BR:mpli03400]
    E1742_20515 (polA)
Enzymes [BR:mpli01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     E1742_20515 (polA)
DNA replication proteins [BR:mpli03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     E1742_20515 (polA)
DNA repair and recombination proteins [BR:mpli03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     E1742_20515 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     E1742_20515 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 FMN_red NYN_YacP
Other DBs
NCBI-ProteinID: QBQ38292
LinkDB
Position
4635601..4638351
AA seq 916 aa
MQKTLLLVDGSSYLYRAFHALPDLRSPDGHPTGAMHGMVNMLRRLRADYPAAYIACVFDA
KGKTFRDDLYPEYKATRASMPSDLSLQIEPIHEAVRAMGWPILMVEGVEADDVIGTLCVT
AEKNGMDVIVSTGDKDLAQLVTAHVTLINTMSNEKLDEAGVLAKFGVPPNRIIDYLTLIG
DTVDNVPGVAKCGPKTAVKWLAQYDSLDGVIANADKITGAVGANLKAALDWLPKGRELIT
VKTDCDLSAHMMSISETLVARDEDHESLLGFFNRYGFKTLLRELSAMTPSSKVPGQTTPA
APEGATGDMFATPPANVKYDLVVTEAQLDEWLERIGKAELVSLDTETTSLEPMTAQLVGI
SMATEPGIACYIPVAHRYQGAPEQLSRDLVLEKLKPWLEDPTKCKLGQNLKYDAHIFANH
GVILRGVVHDTLLQSYVFESHRTHDMDSLAMRHLNHKTIAFEEVCGKGANMICFDQVELQ
RATDYAAEDADITLRLHMAMHGHVAGDEGLTAIYNKIELPTAVVLQKIERNGVLIDAGLL
ATQSDELGARIVELEQKAYELAEQPFNLGSPKQIGEIFFNKLKLPVVKKTPSGAPSTDEE
VLQKLAEDYPLPKILLEYRGMAKLKSTYTDKLPKMINPQTGRVHTNYAQAVAVTGRLASN
DPNLQNIPIRTAEGRRIREAFIAPEGSHLVSADYSQIELRIMAHISGDEAMLRAFAEGVD
IHRATAAEIFGVPPDEVNSEQRRYAKVINFGLIYGMSAFGLAANLGIDRTAAQNYIDRYF
ARFSGVKQYMDETRLEAKANGFVKTVFGRRLWLPEINSPNGPRRQGAERAAINAPMQGTA
ADLIKLAMIAVQDWLEKENLKSRMIMQVHDELVLEVPDDELALVRETLPTLMAGVAQLKV
PLVAEVGVGKNWEEAH
NT seq 2751 nt   +upstreamnt  +downstreamnt
atgcaaaaaaccctgctgctagttgacggttccagttatctctaccgtgccttccatgcg
ctgcccgacctgcgcagcccggacggccatccgaccggcgccatgcacggcatggtcaac
atgctgcgccgcctgcgcgccgactacccggccgcgtacatcgcctgcgtgttcgacgcc
aagggcaagacgttccgcgacgacctgtacccggagtacaaggccacgcgcgcatcgatg
ccgtccgacctgtcgctgcagatcgagccgatccacgaagccgtgcgggcgatgggctgg
cccatcctgatggtcgaaggcgtggaggcggacgacgtgatcggcacgctgtgcgtcacg
gccgagaagaacggcatggacgtcatcgtctcgacgggcgacaaggacctggcgcagctg
gtcacggcgcacgtcaccctgatcaacacgatgagcaatgaaaagctggacgaagcgggc
gtgctggcgaagttcggcgtgccgccgaaccgcatcatcgattacctgaccctgatcggc
gataccgtcgacaacgtgccgggcgtggccaagtgcggcccgaagacggccgtcaagtgg
ctggcacagtacgacagcctcgatggcgtcatcgccaacgcggacaagatcacgggcgcc
gtcggcgccaacctgaaggccgcgctggactggctgccgaaagggcgcgaactgatcacc
gtgaagacggactgcgacctgtccgcgcacatgatgtcgatcagcgaaaccctggtggcg
cgggacgaggaccacgaatcgctgctgggctttttcaaccgctacggcttcaagacgctg
ctgcgcgagctgagcgcgatgacgccgtcaagcaaggtgccgggccagaccacgccggcc
gcgccggaaggggcgacgggcgacatgttcgccacgccgccggccaacgtcaaatatgac
ctggtggtgacggaggcgcagctggacgaatggctggaacgcatcggcaaagcagagctg
gtgtcgctggacacggaaaccacgtcgctggagcccatgacggcgcagctggtgggcatc
tcgatggcgaccgagccggggattgcctgctacatccccgtggcgcaccgctaccagggc
gcgccggaacagctgtcgcgcgacctggtgctggaaaaactcaagccctggctggaagac
ccgacgaagtgcaagctggggcagaacctgaagtacgacgcgcacatcttcgccaaccac
ggcgtgatcctgcgcggcgtcgtacacgacacgctgctgcagtcgtacgtgttcgaatcg
catcgcacgcacgacatggacagcctggcgatgcgccacctgaaccacaagaccatcgcg
ttcgaggaggtgtgcggcaagggcgccaacatgatctgcttcgaccaggtcgagctgcag
cgcgccacggattacgcggccgaggatgcggacatcacgctgcgcctgcacatggcgatg
cacggccacgtggcgggcgacgagggcctgacggccatctacaacaagatcgagctgccg
accgccgtcgtgttgcagaagatcgagcgcaacggcgtgctgatcgacgcgggcctgctg
gcgacccagtccgacgagctcggtgcccgcatcgtcgaactggaacagaaggcctacgaa
ctggccgaacagccgttcaacctgggttcgcccaagcagatcggcgagatcttcttcaac
aagctcaaactcccggtcgtgaaaaagacgccgagcggcgccccctcgacggacgaggaa
gtgctgcagaagctggccgaggactatccgctgccgaaaatcctgctggaataccgcggc
atggccaagctgaagtccacctacacggacaagctgccgaagatgatcaacccgcagacg
gggcgcgtgcacaccaactacgcgcaggccgtggcggtgacgggccgcctggcgtcgaac
gatccgaacctgcagaacatcccgatccgcacggcggaagggcggcgcatccgcgaggcg
ttcatcgcgcccgaaggcagccacctggtgtcggccgactattcgcagatcgagctgcgc
atcatggcgcacatttcgggcgacgaggcgatgctgcgcgcgtttgccgaaggcgtcgac
attcaccgcgccacggcggcggagatcttcggcgtgccgcccgatgaggtgaacagcgaa
cagcgccgctatgcaaaggtgatcaacttcggcctgatctatggcatgagcgcatttggc
ctggccgccaacctgggcatcgaccgcaccgcggcgcagaactacatcgaccggtacttc
gcgcgcttctccggcgtcaagcaatacatggacgagacgcgcctggaagcgaaagccaac
ggcttcgtgaagaccgtattcgggcgccgcctgtggctccccgagatcaattcgccgaac
ggcccgcgccgccagggcgccgaacgggccgccatcaacgccccaatgcagggcacggca
gcggacctgatcaagctggcgatgatcgccgtgcaggactggctggagaaggaaaacctg
aagtcgcgcatgatcatgcaggtgcacgatgaactggtactggaagtgccggacgacgaa
ctggcgctggtgcgcgagacgttgccgacgctgatggcaggggtggcgcaactgaaggtg
ccactggtcgccgaagttggggtagggaagaactgggaggaagcgcactaa

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