Pseudoduganella plicata: E1742_20880
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Entry
E1742_20880 CDS
T06563
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mpli
Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpli03021
]
E1742_20880 (rpoH)
Transcription machinery [BR:
mpli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E1742_20880 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QBQ38354
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Position
complement(4707248..4708147)
Genome browser
AA seq
299 aa
AA seq
DB search
MNTMSAPTALVPAGTSALNLGFSGNLGNLDAYISAVNRLPMLTHDEEVQLGRRLKDNNDL
KAAEKLVLSHLRLVVSIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPDQGVRLVSYAMH
WIKAEMHEYILKNWRLVKVATTKAQRKLFFNLRSHKTGLDAMTPGQIDQLAKLLDVKREE
VIEMETRLSGRDIALESPTDDEDDKFAPIAYLSSDQTEPTKVLEAEQVTRLQSEGLETAL
AKLDPRSRRIVESRWLANDDGSGATLHTLAEEFGVSAERIRQIESAALKKMKGSLAAYV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgatgtccgcacctaccgccctggttccagccggcacaagtgctctgaacctc
ggtttcagcggcaacctgggaaacctggacgcctacatttccgccgtcaaccgcctgcca
atgctgacgcacgacgaagaagtccagctgggccgtcgcctcaaggataacaacgacctg
aaggccgccgaaaagctcgtcctgtcgcacttgcgcctggtggtctcgatcgcccgtggc
tacctgggctatggcctgccgcacgccgacctgatccaggaaggcaatatcggcctgatg
aaggcagtcaagcgcttcgacccggaccagggcgtccggctcgtgtcgtacgcgatgcac
tggatcaaggcagagatgcatgagtacatcctgaaaaactggcgcctcgtcaaagtggca
accacgaaggctcagcgcaagctgttcttcaacctgcgcagccacaagacgggcctggat
gcgatgacgccgggccagatcgaccagctggccaagctgctggacgtcaagcgcgaggaa
gtgatcgagatggaaacccgcctgtcgggccgggacatcgcactggaatcgccgacggac
gacgaggacgacaagtttgccccgatcgcctacctctcgtccgaccagacggagccgacc
aaggtgctggaagcggaacaggtcacgcgcctgcagtccgaaggcctggaaacggcgctg
gccaagctcgatccacgctcgcgccgcatcgtcgaatcgcgctggctggccaacgacgac
ggttcgggcgcgacgttgcacacgctggcagaagagttcggcgtctcggccgagcgcatc
cgccagatcgagtcggccgcgctgaagaaaatgaagggctcgctggccgcttacgtctaa
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