Pseudoduganella plicata: E1742_21990
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Entry
E1742_21990 CDS
T06563
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
mpli
Pseudoduganella plicata
Pathway
mpli02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E1742_21990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpli02000
]
E1742_21990
Transporters [BR:
mpli02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
E1742_21990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_22
AAA_21
nSTAND1
AAA_29
TniB
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QBQ38549
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Position
4982822..4984519
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AA seq
565 aa
AA seq
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MMAPLLQVRGLRIAFRVDRRTTFEAVKGISFNVPQDATVALVGESGSGKSVSSLAIMGLL
PKATTLIAPAGRVLFDGRDVLHLPDAERRALCGRDIAMIFQEPMSSLNPVFTVGYQIGEV
LRRHMGMNRRQARARTLALLDEVGIPDPQAKIDAYPGQMSGGQQQRVMIAMALACEPRLL
IADEPTTALDVTIQKQIIALLAALRRKRRMSVLFITHDLGLVGEIADEVIVMRHGEIRET
GPVRTIFGAPRDNYTRALLHCRPPLDARPWRLPVIADYMDGQVEANPRQRERGYAPDDDI
VLDVRNLKKSFWVKDGLFGRREFQAVKDVSFRLARGKTLGVVGESGSGKSTMGLTLLRLH
EATAGSALFEGTDLLALSKRQFHPYKRRIQIIFQNPYASLNPRFTVGQILLEPMRLHGIG
ADDRERVALVQALLARVGLPPVAYHRYPHEFSGGQRQRIAIARCLTMKPEILVCDESVSA
LDVSVQAQVLNLLQELQDEYGLSYIFISHDLAVVKYISDQVMVMNKGEVVEIGDADELYR
DPRHPYTRTLLGAIPRSPDAAPEAR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgccattattgcaagtgcgcggcctgcgcattgccttccgcgtcgacaggcgg
accacgttcgaagccgtcaagggcatttcgtttaacgtgccgcaggacgccacggtggcg
ctggtgggcgaatcgggcagcggcaagtcggtcagctcgctggccatcatggggctgctg
ccgaaggcgacgaccttgatcgcccccgcgggcagggtcctgttcgacgggcgagacgtg
ctgcacctgccggacgccgagcgccgcgcgctgtgcgggcgcgatatcgccatgatcttc
caggagccgatgtcgtcgctcaatcccgtgttcacggtggggtaccagatcggcgaggtg
ctgcgccggcacatggggatgaaccgccgccaggcgcgggcgcgcaccctggcgctgctg
gacgaagtgggcattcccgacccgcaggcaaagatcgacgcgtatcccggccagatgtcg
ggcgggcagcagcagcgggtgatgatcgcgatggcgctggcctgcgagcccaggctgctg
atcgcggacgaaccgacgacggcgctggacgtgacgatccagaagcagatcattgcgctg
ctggccgcgctgcgccgcaagcgccgcatgtccgtgctgttcattacgcacgacctgggc
ctggtgggcgagatcgccgacgaagtgattgtcatgcgccatggcgagatccgcgagacg
ggtccggtgcggacgatcttcggcgccccgcgcgataactacacgcgcgcgctgctgcac
tgccgcccgccgctggacgcgcggccctggcgcctgccggtcatcgccgattatatggac
ggccaggtcgaggcgaatccacgacagcgcgagcggggttatgcgccggacgacgacatc
gtgctggacgtgcgcaacctgaagaaaagcttctgggtcaaggatgggctgttcggcagg
cgcgagttccaggccgtgaaggacgtgtcgttccggctggcgcggggcaagacgctcggc
gtcgtcggcgaatcgggctcggggaaaagcacgatggggctgacgttgttgcgcctgcac
gaggccacggcgggcagcgcgctgttcgaggggaccgacctgctggcgctgtcgaagcgc
cagttccacccttacaagcggcgcatccagatcatcttccagaatccgtacgcgtcgctc
aacccgcgctttaccgtcggccagatcctgctggagccgatgcgcctgcacggcatcggt
gccgacgaccgcgaacgggtggcgctggtgcaggccctcttggcccgggtgggcctgccc
ccggtggcctatcaccgttatccgcacgagttttccggcggccagcggcagcgcatcgcc
attgcccgctgcctgacgatgaagccggaaatcctcgtctgcgacgaatccgtgtccgcg
ctggacgtctcggtgcaggcgcaggtgctgaacctgctgcaggagctgcaggacgaatac
ggcctgtcctatatcttcatttcgcacgatctggcggtggtgaaatacatctccgaccag
gtcatggtgatgaacaagggagaggtcgtggagatcggcgatgcggatgagctgtaccgc
gatccccgccatccgtacacgcgcacgctgctgggcgcgataccccgatcgcccgatgcg
gcccctgaagcccggtga
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