Pseudoduganella plicata: E1742_22010
Help
Entry
E1742_22010 CDS
T06563
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
mpli
Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpli03009
]
E1742_22010
Enzymes [BR:
mpli01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
E1742_22010
Ribosome biogenesis [BR:
mpli03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E1742_22010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QBQ38553
LinkDB
All DBs
Position
4987900..4989918
Genome browser
AA seq
672 aa
AA seq
DB search
MNNTDKTTETGAQEPAAAAAAVKPKRRTKAQIEADNAALLAAGETPKPKRTRKAAAPAEA
GVAAAADVTPAAPEAPADAAPRKPRARVAKPKADAVAPAPAAVAAQPDAPVEAAPAEEQK
SPRGPRGPRQMRAQRALRDAEKAQHAEAAPAGEQPAEAQPEAVQGEGAPARTGRQGRNAE
GRNVEGRNTEGRNTEGRNGEARGKRKGKPGPPGQQLQGQQGGRRGGQGANGAKPSEADAV
FSFVTSDAFDRDEGARGKGPQKAVRRDLTAEDDAPKLHKVLAEAGLGSRRDMEDLIVAGR
VSVNGEPAHIGQRILPTDAVRINGKLIQRKVSKKPPRVLVYHKPAGEIVSHDDPEGRPSV
FDRLPTMKVGKWLAVGRLDFNTEGLLLFTTSGDLANRLMHPRYNIDREYAVRTLGVLEEG
MRQKLLAGVELEDGLAQFSKIADGGGEGINKWYRVVIGEGRNREVRRMFEAVGLTVSRLI
RTRYGALTLPSNLKRGRWEEMEENTVRDLLAMVGVEKKASGDGAPAKVGNVRGERGERGN
ERGAERGNERGNDRRAGRGEKEPNFNRLDVSNKNADPFPQAPRGPRGGQGQGSYFGAGGS
GRPGTAGRGQGFGRAGLGDQNGGRPAQPGKGRGPKQPDPLQTTFGFAGQQPRRGGPPRGG
AIDHGMPRRRKG
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacacagataagaccaccgagaccggcgcccaggaaccagccgcagcggcagcc
gccgtcaagcccaagcgccgtaccaaggcccagatcgaggcggataacgcggccctgctg
gctgcaggcgaaacgccgaagccgaagcgcacccgtaaggccgccgcgcctgccgaagcc
ggtgtcgctgccgccgcggacgtgacgccagccgcgccggaagcgccggccgatgccgcc
cccaggaagccacgcgcccgagtggccaagccgaaagcggacgccgtagcgcccgcaccg
gccgcggtcgccgcgcagccggacgctccggtcgaggcagcaccggccgaagaacagaaa
tcgccgcgcggcccacgtggtccacgccagatgcgtgcccagcgcgcattgcgcgatgcc
gaaaaggcacagcacgccgaagcggcgccagcgggcgagcagcctgccgaagcgcagccg
gaagcggtccagggcgaaggcgcgccggcgcgcaccggtcgccagggccgcaatgccgaa
ggccgcaatgttgaaggccgcaacaccgaaggccgcaacaccgaaggccgcaatggcgaa
gcgcgcggcaagcgcaagggcaagccgggtccgcccggccagcagctgcaaggccagcag
ggcggacgccgcggcggccagggtgccaacggcgccaagccaagcgaagccgatgccgtg
ttctcgttcgtgacgtccgacgcgttcgaccgcgacgagggcgcgcgcggcaaggggccg
cagaaagcggtacgccgcgacctgacggccgaagacgacgcaccgaagctgcacaaggtg
ctggcggaggcgggcctgggctcgcgccgcgacatggaagacctgatcgtcgcgggccgc
gtgtccgtcaatggcgagccggcccatatcggccagcgcatcctgccgaccgatgccgtg
cgcatcaacggcaagttgatccagcgcaaggtcagcaagaagccgccacgggtgctggtg
taccacaagccggctggcgaaatcgtctcgcatgacgatccggaaggccgtccgtccgtg
ttcgaccgcctgccgacgatgaaggtcggcaaatggctggccgtcggccgccttgacttc
aatacggaaggcctgttgctgttcacgacgtccggcgacctcgccaaccgcctgatgcac
ccgcgttataacatcgaccgcgaatacgccgtgcgcacgctgggcgtgctggaagaaggc
atgcgccagaagctgctggccggcgtcgagctggaagacggcctggcgcagttctccaag
atcgccgacggcggcggcgaaggcatcaacaagtggtaccgcgtggtgatcggcgaaggc
cgtaaccgcgaggtgcgccgcatgttcgaagccgtcggcctgacggtgtcgcgcctgatc
cgtacccgctacggcgcgctgaccctgccgagcaacctgaagcgcggccgctgggaagag
atggaagaaaacacggtacgcgacctgctggcgatggtcggtgtcgagaagaaggcgtcc
ggcgacggcgcgccggccaaggtcggcaacgtccggggcgagcgcggcgaacgcggcaat
gagcggggggcggagcgcggcaatgagcgcggtaacgatcgtcgcgctggccgcggcgag
aaggagccaaacttcaaccgcctggatgtcagcaacaagaacgccgatccgttcccgcag
gcaccgcgcggtccgcgcggcggccaggggcagggcagctacttcggcgccggcggctcg
ggccgtccgggtactgccggccgtggccagggcttcggccgtgccggcctgggcgaccag
aacggcggccgtccggcccagccgggcaaaggccgcggtccgaaacagccagatccgctg
cagacgacgtttggttttgctggtcagcaaccacgtcgcggcggtccgccgcgcggcggg
gcgatcgaccacggcatgccgcgccgccgcaagggttaa
DBGET
integrated database retrieval system
