Pseudoduganella plicata: E1742_22960
Help
Entry
E1742_22960 CDS
T06563
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
mpli
Pseudoduganella plicata
Pathway
mpli03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
E1742_22960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
mpli03011
]
E1742_22960
Ribosome [BR:
mpli03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
E1742_22960
Bacteria
E1742_22960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
CPSF73-100_C
Motif
Other DBs
NCBI-ProteinID:
QBQ38711
LinkDB
All DBs
Position
5197272..5198948
Genome browser
AA seq
558 aa
AA seq
DB search
MESFAALFEESLSRQDMRSGEVISAEVVRLDHNFVIVNAGLKSEAFIPVEEFKNDQGELE
VKVGDFVSVAIESLENGFGDTILSRDKAKRLASWLALEKAMESGEIVTGTVNGKVKGGLT
VLTNGIRAFLPGSLVDTRPVKDTTPFEGKTLEFKVIKLDRKRNNVVLSRRAVIEASMGEE
RQKLMETLKEGTVVTGVVKNITDYGAFVDLGGIDGLLHITDLAWRRVRHPSEVLTVGQEI
TAKVLKYDQEKNRVSLGVKQLGDDPWTGLSRRYPQGTRLFGKVTNLTDYGAFVEVEQGIE
GLVHVSEMDWTNKNVAPNKVVQLGDEVEVMVLEIDEERRRISLGMKQCKANPWDDFGVTH
KKGDKVKGAIKSITDFGVFIGLAGNIDGLVHLSDLSWTEPGEEAVRKFKKGDELEAIVLA
IDVERERVSLGVKQLEGDPFNNFAAMNDKGSLVTGTVKSVEPKGAVIALSEEVEGYLRAS
EISRDRVEDAGTHLKVGDSVEALVINIDRKARSIQLSIKAKDNAETAEQMQKMATDSSAA
SGTTSLGALLKAKFDNKN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtttcgcagccctcttcgaagagtccctgtcacgtcaagacatgcgctccggc
gaagtgatctccgctgaagtcgtgcgtctggatcacaactttgtgatcgtcaacgccggc
ctgaaatcggaagctttcatccctgttgaagaattcaagaatgaccagggcgaactggaa
gtcaaagttggtgacttcgtttccgtggccatcgaatcgctggaaaatggtttcggcgat
accatcctgtcgcgcgacaaggccaagcgtctggcttcgtggctggcactggaaaaagca
atggaatccggcgagatcgtcaccggtaccgtcaatggcaaagtcaagggcggcctgacc
gttctgaccaacggcatccgcgcattcctgccgggttcgctggtcgacacccgtccggtc
aaggacacgaccccattcgaaggcaagaccctcgaattcaaggttatcaagctggaccgc
aagcgtaacaacgtcgttctgtcccgccgcgccgtcatcgaagcatcgatgggcgaagag
cgtcagaaactgatggaaacgctgaaggaaggcacggtcgtgaccggcgtcgtcaagaac
atcaccgactacggcgcgttcgtggatctgggcggtatcgacggcctgctgcacatcacc
gacctggcatggcgtcgcgtgcgtcacccgtcggaagtgctgacggttggccaggaaatc
accgcgaaagtgctgaagtacgatcaggaaaagaaccgtgtttcgctgggcgtgaagcag
ctgggcgacgatccttggaccggtctgtcccgtcgttacccgcaaggcacccgtctgttc
ggtaaagtcacgaacctgaccgactacggcgcgttcgtggaagtcgagcagggcatcgaa
ggtctggtgcacgtgtccgagatggactggacgaacaagaacgtcgctccgaacaaagtc
gtgcagctgggcgacgaagtcgaagtcatggtcctggaaatcgacgaagaacgtcgtcgt
atctccctgggcatgaagcagtgcaaggccaacccttgggacgacttcggtgtcacccac
aagaagggcgacaaggtcaagggcgcgatcaagtcgatcaccgacttcggcgtgttcatc
ggcctggccggcaacatcgacggcctggtacacctgtccgacctgtcctggaccgagcct
ggcgaagaagccgtgcgcaagttcaagaagggcgacgagctggaagccatcgttctggcc
atcgacgtcgagcgcgagcgtgtctccctgggcgtgaagcagctggaaggcgacccgttc
aacaacttcgcagccatgaacgacaagggctcgctggtcaccggtaccgtcaagtccgtt
gagccaaaaggcgccgtcatcgctctgtccgaagaagtcgaaggctacctgcgcgcttcc
gaaatctcccgcgatcgcgtggaagatgccggtacgcacctgaaggtcggcgactccgtc
gaagccctggtcatcaacatcgaccgcaaggcacgcagcattcaactgtccatcaaggcc
aaggacaatgctgagaccgccgagcagatgcagaagatggcaaccgacagcagtgcagct
tccggcaccaccagcctgggcgcactgctgaaggccaagttcgacaacaagaactaa
DBGET
integrated database retrieval system
