Pseudoduganella plicata: E1742_22965
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Entry
E1742_22965 CDS
T06563
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
mpli
Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpli03032
]
E1742_22965
03036 Chromosome and associated proteins [BR:
mpli03036
]
E1742_22965
03400 DNA repair and recombination proteins [BR:
mpli03400
]
E1742_22965
DNA replication proteins [BR:
mpli03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E1742_22965
Chromosome and associated proteins [BR:
mpli03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
E1742_22965
DNA repair and recombination proteins [BR:
mpli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
E1742_22965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Par3_HAL_N_term
CATASP
Motif
Other DBs
NCBI-ProteinID:
QBQ38712
UniProt:
A0A4P7BKA7
LinkDB
All DBs
Position
5198979..5199284
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELINRLAERYSQLVAKDAEYAVKTILDAMTGALANGQRIEIRGFGSFALNSRPPRI
GRNPKSGDKVMVPEKRVPHFKPGKQLRERVDAMVGQPIIED
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgaactgatcaatcgcctggctgaacgctattcccagctggtggcgaag
gacgcggagtatgccgtcaagaccatcctcgatgcgatgacgggcgccctggcgaacggc
cagcgcatcgagatccggggctttggcagctttgcgctgaacagccggccgccgcgcatc
ggacgcaatccgaagtccggcgacaaggtgatggtgcccgaaaagcgggtgccccacttc
aagccgggcaagcagttgcgcgagcgggtcgatgcgatggtcgggcagccgatcatcgag
gactga
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integrated database retrieval system
