Pseudoduganella plicata: E1742_22975
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Entry
E1742_22975 CDS
T06563
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
mpli
Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
E1742_22975 (lapB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_19
TPR_7
TPR_14
TPR_2
Zn_ribbon_LapB
TPR_1
PPR
TPR_12
TPR_CcmH_CycH
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QBQ38714
LinkDB
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Position
5199764..5200939
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AA seq
391 aa
AA seq
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MEFELWWLLGIPAFFGLGWIAARVDIRQLVSESRTLPRGYFKGLNHLLNDQPDKAIDSFV
EIVRADPEAAEMHFALGNLFRRRGETERAIRVHQNLLSRPDLPADERAHAEYELGQDYLK
AGLLDRAEETYTRLLETSYAVQARRALLEIFQREKEWVRAIEAAIALQEAGAGSRQREIA
QFYCELAQDALVHMHPDDALPLLEKALHADRTSVRATILVGDVQGAKGDTEGALATWRRV
EQQSVPHVALVAQRLMDGYRKVGRPEEGVSLLKSYLQQASSIDLLEVVFKATLELEGVDA
AKQLVGDELRRTPTLLGLDKFLEARMLDAPPAVLGELSLVKNLVHGYTQKLARYQCSHCG
FKARQFYWHCPGCSRWETYPPRRTEELNVMN
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgaactctggtggttactgggtatcccggcattcttcggcctgggatggatt
gccgcgcgtgtcgatatccgccagctggtgtccgaatcgcgcacgctgccgcgcggctat
ttcaagggcctgaaccacctgctgaacgaccagccggacaaggcgatcgattcgtttgtc
gagattgtccgcgcggacccggaggcggccgagatgcacttcgcgctggggaacctgttc
cgccgccgcggcgagacggaacgggcgatccgggtccaccagaacctgctgtcgcggccc
gacctgcccgccgacgaacgggcccacgccgagtatgagctgggccaggattacctgaag
gcgggcctcctggaccgggccgaggaaacctatacgcgcctgctggagacgtcctacgcg
gtgcaggcgcggcgcgcgctgctggagatcttccagcgcgaaaaggagtgggtgcgcgcc
atcgaagcagccattgcactgcaggaggcgggtgccggctcgcgccagcgcgagatcgcg
cagttctattgcgagctggcgcaggacgcgctggtgcacatgcatcccgacgatgcgctg
ccgctgctggaaaaggcgctgcacgcggatcgcaccagcgtgcgcgccacgatcctcgtg
ggcgacgtgcagggggccaagggcgacaccgaaggcgcgctggcgacgtggcgccgcgtg
gaacagcaaagcgtgccgcacgtggcgcttgtcgcgcagcgcctgatggacggctaccgg
aaagtcggccggccggaagaaggcgtcagcctgctcaaatcgtacctgcagcaggcgtcg
tcgatcgacttgctggaagtcgtgttcaaggccacgctggagctggaaggagtggacgcg
gccaagcagctcgtcggcgacgaactgcgccgtacgcccacgctgctgggcctcgacaaa
ttcctggaggcgcgcatgctcgatgcgccgcccgccgtgctgggcgagctgtcgctggta
aagaacctggtgcatggctacacgcagaagctggcgcgctaccagtgcagccattgcggc
ttcaaggcccgccagttctactggcattgccccggctgcagccgctgggagacgtatccg
ccgcgccggaccgaagaactgaatgtgatgaattaa
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