Pseudoduganella plicata: E1742_23200
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Entry
E1742_23200 CDS
T06563
Name
(GenBank) LysR family transcriptional regulator
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
mpli
Pseudoduganella plicata
Module
mpli_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpli03000
]
E1742_23200
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
mpli01504
]
E1742_23200
Transcription factors [BR:
mpli03000
]
Prokaryotic type
Helix-turn-helix
LysR family
E1742_23200
Antimicrobial resistance genes [BR:
mpli01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
E1742_23200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QBQ38749
UniProt:
A0A4P7BM83
LinkDB
All DBs
Position
complement(5255779..5256693)
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AA seq
304 aa
AA seq
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MDRFDAMRLFTRIVELGNFSKAADDLKLPAATATHAIRQLEARLGVRLLHRTTRKVTPTS
DGQAYYGRCLRILADVEETEAGFGHSGVAPKGRLRIDLPTLGRVFVLPRLHEFFSRYPDI
ELEIGLGDRHVDLVAEGVDCVLRVGELRDSSMVGRRVATLPQVTCASAAYLARHSMPATL
DELRGHQAVNWYSSSSARMLPFEFMVEGTLRSLSLPGKVSVSEGEAYAACCVGDMGLAQL
PRYRVHALLQSGRLCEVLPQHPPPPLPVTVLYPHQRQLSPRVRVFADWVAEVMATAHAVQ
PPIC
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtttcgatgcgatgcgcctgttcacccggatcgtcgagctgggcaacttcagc
aaggcggccgacgacctgaagctgcccgccgccacggccacccacgccattcgccagctg
gaggcacggttgggcgtgcgcctgctgcaccggaccacgcgcaaggtcacgcccacgtcg
gacggccaggcgtactacggccgctgcctgcgcatcctggccgacgtcgaggaaacggaa
gcaggcttcggccacagcggcgtggcgcccaagggcaggctgcgcatcgacctgccgacc
ctgggccgcgtcttcgtgctgccgcgcctgcacgagtttttttcccgctatcccgacatc
gaactggagatcgggctgggcgaccgccacgtcgacctggtggccgaaggcgtcgactgc
gtgctgcgggtgggcgaactgcgcgactccagcatggtgggacggcgcgtcgccaccctg
ccgcaagtcacgtgcgccagcgccgcctacctggcgcggcacagcatgccggccacgctg
gacgagctgcgcgggcaccaggccgtcaactggtactcgtcgtccagtgcgcgcatgctg
ccgttcgagttcatggtggaaggcacgctgcgctcgctgtcgttgcccggcaaggtcagc
gtcagcgaaggcgaggcgtatgcggcctgctgcgtgggcgatatgggactggcgcagctg
ccccgctaccgcgtgcatgccctgctgcagtcgggccggctgtgcgaggtgctgccgcag
catccaccgcctccgctgccggtcacggtgctgtacccgcaccagcgccagctgtcgcca
cgcgtgcgcgtgttcgccgactgggtggcggaggtgatggcgacggcgcatgccgtgcag
ccgccaatctgttga
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