Pseudoduganella plicata: E1742_23225
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Entry
E1742_23225 CDS
T06563
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
mpli
Pseudoduganella plicata
Pathway
mpli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
E1742_23225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpli03400
]
E1742_23225
Enzymes [BR:
mpli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
E1742_23225
DNA repair and recombination proteins [BR:
mpli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
E1742_23225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QBQ38754
UniProt:
A0A4P7BIQ5
LinkDB
All DBs
Position
complement(5262791..5264143)
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AA seq
450 aa
AA seq
DB search
MTPPDPAFEQPAVITVSALNQAVGRLLERSFPLTWIAGEISNFTRASSGHWYFTLKDDGA
QVRAVMFRGRAQYAGFVPREGDKVEVRALVTLYGPRGDYQINVEAIRRAGVGALFEAFMR
LKEKLTAAGLFDEARKRPLPLFPRTVGIVTSPQAAALRDVLTALRRRAPHVRVVLYPTLV
QGQLAAAQIADAIDTASMRAECDVLIVCRGGGSIEDLWCFNEEAVAYAIANCRMPVISGV
GHETDFTIADFAADLRAATPTAAAELAATPRGDWLASLRADATDLRRAMRRTLDNAGQTL
DYHARRLLSPTARIRQQRLQLLALSTAMMHATRAPLSASRHALDKVAGRLAARRPDTRAV
RARLAALQHRCAINIDTQLAHRREALNALAAQLEMLNPQRTLERGYAIVTDAKGAILRSP
REIQPRSALKVRLAEGSAVVEVGTVQVGLE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgcccgatcccgccttcgaacaacctgccgtcatcaccgtcagcgcgctgaac
caggccgtcggccggctgctggagcgctcgttcccgttgacgtggatcgccggcgagatt
tccaacttcacgcgcgccagttccggccactggtatttcacgttgaaggacgacggcgcc
caggtgcgtgcggtgatgttccgtggccgtgcccaatatgccggcttcgtgccgcgcgag
ggcgacaaggtggaggtgcgtgccctggtcacgctgtacggcccgcgcggggattaccag
atcaacgtggaagccatccgccgcgcaggcgtgggcgcgctgttcgaagcgttcatgcgg
ctgaaggaaaagctgacggcggcgggcctgttcgacgaggcccgcaagcgccccctgccc
ctgttcccgcgcaccgtcggcatcgtcaccagcccgcaggcagccgcgctgcgcgacgtg
ctgacggcgctgcgccggcgcgcgccgcacgtgcgcgtcgtgctgtacccgacgctggtg
cagggccagctggccgccgcgcagatcgccgatgccatcgacacggcatcaatgcgagcc
gagtgcgacgtgctgatcgtctgccgcggcggcggcagcatcgaggacctgtggtgcttc
aacgaggaagcggtggcgtacgcgatcgccaattgccgcatgccggtcatttccggcgtg
ggccacgagaccgatttcaccatcgccgatttcgcggccgacctgcgcgcggccacgccc
acggccgccgccgaactggcggccacgccacgcggcgactggctggcatcgctgagggcc
gacgccacggacctgcgccgtgccatgcgccgcacgctggacaacgccgggcagacgctg
gactatcacgcccgccgcctgctcagccccacggcgcgcatccgccagcagcgcctgcaa
ctgctggcgctgtccacggccatgatgcatgcgacgcgtgcgcctttgagcgcgtcgcgc
catgcgctggacaaggtggcgggacgcctggccgcgcgccgtcccgacacgcgcgccgtg
cgggcccggctggcggcgctgcagcaccgctgcgccatcaatatcgatacgcagctggcg
cacaggcgcgaggcgctgaacgcgctggctgcgcagctcgaaatgctcaatccccaacgc
acgctcgagcgcgggtatgccatcgtcacggatgcgaaaggggcgatcctgcgctcgccg
cgcgagatccagccgcgcagcgcattgaaggtgcggctggccgaagggagtgcggtggtg
gaggttgggactgtgcaggtgggcttggagtag
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