Pseudoduganella plicata: E1742_24225
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Entry
E1742_24225 CDS
T06563
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mpli
Pseudoduganella plicata
Pathway
mpli00260
Glycine, serine and threonine metabolism
mpli00460
Cyanoamino acid metabolism
mpli00630
Glyoxylate and dicarboxylate metabolism
mpli00670
One carbon pool by folate
mpli00680
Methane metabolism
mpli01100
Metabolic pathways
mpli01110
Biosynthesis of secondary metabolites
mpli01120
Microbial metabolism in diverse environments
mpli01200
Carbon metabolism
mpli01230
Biosynthesis of amino acids
mpli01240
Biosynthesis of cofactors
mpli04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
E1742_24225
09102 Energy metabolism
00680 Methane metabolism
E1742_24225
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
E1742_24225
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
E1742_24225
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
E1742_24225
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
E1742_24225
Enzymes [BR:
mpli01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
E1742_24225
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QBQ38912
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Position
5503474..5504721
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AA seq
415 aa
AA seq
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MFAKDHTLAAIDPELFGAIQNENRRQHDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAVLKPGDTIMGMS
LAEGGHLTHGMALNMSGKWFNVVSYGLTAEEDIDYDAMEKLAHEHKPKLIVAGASAFSKK
IDWARFAKVAKDIGAYFMVDMAHYAGLIAAGLYPNPVPHADFVTSTTHKSLRGPRGGIIL
MKAEHEKIINSAIFPGIQGGPLMHVIAGKAVAFKEAQGAEFKAYQAQVIKNADVLAKTLI
KRGLRIVSGGTESHVFLVDLRAKNLTGKEAEAILGSAHITTNKNGIPNDPQKPFVTSGIR
LGSPAMTTRGFKELESEEVGNLIADVLDNPHDAATIERVKAAVKVLADKFPVYAA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcaaaagatcacaccctcgccgccatcgacccggaactgttcggcgccatccag
aatgagaaccgtcgccagcacgatcacatcgagctgatcgcttcggaaaactacacgtcg
cccgccgtcatggaggcacagggctcccagctgaccaacaaatatgcggaaggctatccg
ggcaagcgctactacggcggctgcgaatacgtcgacgtcgtcgaacagctggccatcgac
cgcgtcaagcagctgtttggcgccgaagcggcaaacgtgcagccgaactcgggttcccag
gccaaccagggcgtgttctttgccgtgctcaaaccgggcgacacgatcatgggcatgtcg
ctggccgaaggcggccatctgacgcacggcatggcgctgaacatgtccggcaaatggttc
aacgtggtgtcgtacggcctgacggctgaggaagacatcgactacgacgccatggagaag
ctggcccacgaacacaagccgaagctgatcgtggccggcgcctcggcgttctcgaagaag
atcgactgggcgcgtttcgccaaggttgccaaggacatcggcgcctacttcatggtcgac
atggcccactatgccggcctgatcgccgccggcctgtacccgaatcccgtgccgcacgcc
gacttcgtcacgtccaccacgcacaagtcgctgcgcggtccgcgcggcggcatcatcctg
atgaaggccgagcacgagaagatcatcaactcggcgatcttccccggcatccagggcggc
ccgctgatgcacgtgattgccggcaaggccgtcgcgttcaaggaagcgcaaggcgccgag
ttcaaggcttaccaggcacaagtcatcaagaatgccgacgtgctggccaagaccctcatc
aagcgcggcctgcgcatcgtttccggcggcaccgagtcgcacgtgttcctcgtcgacctg
cgcgccaagaacctgactggcaaggaagccgaagccatcctgggcagcgcgcacatcacg
accaacaagaacggcattccgaacgatccgcagaagccgttcgtgacgtccggcatccgc
ctgggcagcccggccatgacgacgcgcggcttcaaggagcttgagtccgaagaagtgggc
aacctgatcgccgacgtactggacaacccgcacgacgccgcgacgatcgaaagagtcaag
gccgccgtcaaggtcctggccgacaagttccccgtctacgcggcctga
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