Pseudoduganella plicata: E1742_24965
Help
Entry
E1742_24965 CDS
T06563
Name
(GenBank) 3'-5' exonuclease domain-containing protein 2
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mpli
Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpli03016
]
E1742_24965
Enzymes [BR:
mpli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
E1742_24965
Transfer RNA biogenesis [BR:
mpli03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
E1742_24965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
WD40_CFAP43
Motif
Other DBs
NCBI-ProteinID:
QBQ39032
LinkDB
All DBs
Position
complement(5662285..5662995)
Genome browser
AA seq
236 aa
AA seq
DB search
MADYRERAHATAPEPELPPYHGIALSAVHLVRTAAEAQAAQEALLACDAIGFDTESKPTF
VKGQSSDGPHLVQFANDAAAWLFPVGTAPGTDIAAVLPALKAILEADQTLKVGFGLSDDM
KRVRSKLGIEPARVADLSVALRSPGQKHDLGAKSAVARFFGRKLLKSKKISTTNWAAPRL
TDKQMLYAADDAQVALRIYRHWLALGNALPPPRAPRTPRRPTPARQAGTAGERGKD
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggcagactaccgcgagcgcgcccatgccacggcgcccgagccggagctgccgccgtat
cacggcattgccctctccgccgtgcacctggtgcgcacggcggccgaggcgcaggccgcg
caggaagccctgctggcgtgcgacgccatcggcttcgataccgaatcgaaacccacgttc
gtcaaggggcagagctcggacggtccgcatctggtgcagttcgccaatgacgctgccgcc
tggctgttccccgtcggtaccgcgcctgggaccgacattgcggccgtgctgccggcgctg
aaggcgatcctggaagcggatcagaccttgaaggtgggcttcggcctgtccgatgacatg
aagcgcgtgcgctcgaagctgggcatcgagcctgcgcgggtggcggacctgtccgtggcg
ctgcgctccccaggccagaagcacgacctgggcgcgaagagtgccgtggccaggttcttc
gggcgcaaactgctcaaatcgaaaaaaatctccaccaccaactgggccgctccacgcctc
acggacaagcagatgctgtacgcggccgacgatgcccaggtggcgctgcggatctaccgg
cactggctggcgctgggcaatgcgctgccgccgccgcgcgcgccgagaacgccgcgacgg
ccgacgccggcacgccaagccggcacggcaggagagcgcggcaaggactga
DBGET
integrated database retrieval system
