Pseudoduganella plicata: E1742_25585
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Entry
E1742_25585 CDS
T06563
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
mpli
Pseudoduganella plicata
Brite
KEGG Orthology (KO) [BR:
mpli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpli03400
]
E1742_25585 (radA)
DNA repair and recombination proteins [BR:
mpli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E1742_25585 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
AAA_22
GvpD_P-loop
AAA_16
AAA_24
ChlI
Lon_C
SLFN-g3_helicase
DUF7125
nSTAND3
RecA
AAA_14
Rad51
AAA
AAA_5
Zeta_toxin
ABC_tran
CobU
NTPase_1
MCM
TniB
PAXNEB
AAA_29
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
QBQ39132
LinkDB
All DBs
Position
5802730..5804103
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AA seq
457 aa
AA seq
DB search
MAKAKTNYTCSECGGTTNKWTGQCPACRQWNTMVETVVESAGNNRLSQGHQALAQTAPVL
SLHEIEALDVPRFGTGIEEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQALAEMSRARS
VLYVSGEESGAQIALRAKRLAIDAKDFKLQAEIQLEKILGTLADVKPQVAVIDSIQTLYS
DALTSAPGSVAQVRECAAQLTRVAKQTGVTIILVGHVTKEGALAGPRVLEHIVDTVLYFE
GDSHSSFRLVRAIKNRFGAVNELGVFAMTEKGLKGVSNPSALFLSQHDNQVPGSCVMVTQ
EGTRPLLVEIQALVDASHLPNARRLSVGLEQNRLAMLLAVLHRHAGIAAFDQDVFINAVG
GVKITEPAADLAVLLAINSSMRNKPLPRGFVVFGEVGLAGEIRPAPRGQERLREATKLGF
SIAMIPKANAPKQPIEGMTIIAVDRIDDAFNRLRELQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaaagacgaattacacatgcagcgaatgcggcggcaccaccaacaaatgg
acgggccagtgccccgcgtgccggcagtggaacacgatggtggaaaccgtcgtcgagagc
gccggcaacaaccggctgtcgcagggccaccaggcgctggcgcagacggcgcccgtgctg
tcgctgcacgagatcgaggcgctcgacgtgccccgtttcggtacgggcatcgaggagttc
gaccgtgtgctgggcggcgggctggtggcgggcggcgtcgtgctgatcggcggcgacccc
ggcatcggcaagtcgacgctgctgctgcaggcgctggcggagatgtcgcgcgcgcgcagc
gtgctgtacgtgtcgggcgaggagtccggcgcgcagatcgcgctgcgggcgaaacggctc
gccatcgatgcgaaggacttcaagctgcaggccgagatccagctggagaagattctcggc
acgctggccgacgtcaagccgcaggtggccgtcatcgactcgatccagacgctgtattcg
gatgcgctgacctcggcccccggttccgtggcccaggtacgcgagtgcgcggcccagctg
acgcgggtggccaagcagacgggcgtgacgatcatcctcgttggccacgtgacgaaggaa
ggcgcgctggcggggccgcgcgtgctggaacacatcgtcgacacggtgctgtacttcgaa
ggcgacagccattccagcttccgcctggtgcgcgccatcaagaaccgcttcggcgccgtc
aacgagcttggcgtgtttgccatgacggaaaagggcctgaagggcgtatcgaatccatcc
gcgctgttcctgtcgcagcacgacaaccaggtgcccggatcctgcgtgatggtgacccag
gagggcacgcgtccgctgctcgtcgagatccaggcgctggtcgatgccagccacctgccg
aacgcgcgccggctgtccgtcggcctggaacagaaccggctggcgatgctgctggccgtg
ctgcaccggcacgccggcatcgccgcgtttgaccaggatgtgttcatcaatgccgtcggt
ggcgtgaagatcacggagccggcggccgacctggccgtgctgctggcgattaactcgtcg
atgcgcaacaagccgctgccgcgcgggtttgtcgtatttggcgaagtgggcctggcgggc
gaaatccgtcccgcgccgcgcggccaggagcgcctgcgcgaggcaaccaagctgggcttc
tcgattgccatgatcccgaaagcgaacgcgccgaagcagcccatcgaagggatgacgatc
atcgccgtcgaccgcatcgacgatgcgttcaaccgcttgcgcgaattgcagtga
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