Microbacterium plantarum: VC184_01005
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Entry
VC184_01005 CDS
T09931
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mpln
Microbacterium plantarum
Brite
KEGG Orthology (KO) [BR:
mpln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpln03032
]
VC184_01005
03400 DNA repair and recombination proteins [BR:
mpln03400
]
VC184_01005
Enzymes [BR:
mpln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
VC184_01005
DNA replication proteins [BR:
mpln03032
]
Prokaryotic type
DNA Topoisomerases
VC184_01005
DNA repair and recombination proteins [BR:
mpln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VC184_01005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Med14
Motif
Other DBs
NCBI-ProteinID:
WRK17622
LinkDB
All DBs
Position
198265..199227
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AA seq
320 aa
AA seq
DB search
MARLVRVRPDVDAGIRRIRSGKGFRYTDADGGAVGRRDLARIRSIVIPPAWKDVWICADP
QGHIQVVGTDDAGRRQYIYHPDWTRSRDKGKYARALQLAGSLPRARSRATASLRRADLDR
ERVLAAAFRLLDRSALRIGSQRYLLQHGSRGLTTLRRRDASVADTVVSLAFSGKSGQRQA
LEIPDPDLATAIMLLIEGRPSSPLLAWQRQRRRVPLTPNDVNAYVRALTGGPFTAKDFRT
LRGTVIAADALARIGVAETARAVHQAEVEAVRAAATALGNTPAVARSSYIDPRVFERYRS
GMLLDTTVSPETAIRSLVLG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgactcgtccgggtccggcccgatgtcgatgccggcatccggcgcatccgctca
ggcaagggcttccggtacacggatgccgacggcggggcggtcgggcggcgcgacctcgcc
cgcatccgcagcatcgtcatcccgcccgcctggaaggacgtctggatctgcgcggatccg
caggggcacatccaggtcgtcggaaccgacgatgcgggtcgtcgacagtacatctaccac
ccggactggacgcgcagtcgtgacaagggcaagtacgcccgggcgctgcagctcgccgga
tccctgccacgtgcccgctcgcgtgcgaccgcgtcgttgcgacgcgccgacctcgatcgc
gagcgcgtcctcgccgcggcattccggctgctcgaccggtcggcgctgcgcatcggttcg
cagcgctacctgctgcagcacggcagccgcgggctgacgacgctgagacgtcgcgacgcc
tccgtggccgacaccgtcgtgagcctggcattctcgggcaagagcggacagcgccaggcg
ctcgagatccccgacccggacctcgccacggccatcatgctcctgatcgaggggcgcccc
tcgtcgccgctgctcgcgtggcagcggcagcgccggcgggttccactcaccccgaacgac
gtcaacgcatacgtgcgtgcgctgacgggcggcccgttcaccgccaaggacttccgcact
cttcgcggcaccgtcatcgcggcggacgccctcgcacgaatcggcgtcgctgagacggcc
cgggccgtgcatcaggccgaggtcgaagccgtgcgcgccgccgcgacggcgctggggaac
acccccgcggtcgcgcgcagctcgtacatcgacccgcgcgtgttcgaacgatatcgctcg
gggatgctgctcgacacgacggtctcacccgagacggccatccgttcgctcgtcctcggc
tga
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integrated database retrieval system
