Microbacterium plantarum: VC184_01200
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Entry
VC184_01200 CDS
T09931
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mpln
Microbacterium plantarum
Pathway
mpln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VC184_01200 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpln03019
]
VC184_01200 (recQ)
03400 DNA repair and recombination proteins [BR:
mpln03400
]
VC184_01200 (recQ)
Enzymes [BR:
mpln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VC184_01200 (recQ)
Messenger RNA biogenesis [BR:
mpln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VC184_01200 (recQ)
DNA repair and recombination proteins [BR:
mpln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VC184_01200 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
SBP_bac_11
SelB-wing_2
Motif
Other DBs
NCBI-ProteinID:
WRK17661
LinkDB
All DBs
Position
240614..242680
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AA seq
688 aa
AA seq
DB search
MSREQQSWDADPYADLDWNPDEFAPPEDFDAPPPPEFDGYGAAVARATRDRASAGAAPPR
AAPPRAVPNAAPAAVLSLERRDFTGADPRAVLKEVFGYDDFRGDQGDIVSHVIGGGDAVV
LMPTGGGKSITYQVPALVRPGTGLVVSPLIALMHDQVDALIANGVRAAYLNSTQSPGERA
GVEQAYLAGQLDLLYVAPERLSVPQTTQLLQRGALSVIAIDEAHCVSQWGHDFRPDYLAL
GDLDERFPGVPRMALTATATRATHQELTERLRLPQARHFVASFDRPNIQYRIEPKVDPRR
QLVTFIRSMPEGSAGIVYALSRKSVEQTADYLAAQGLDALPYHAGLPAEMRAKHQSRFLR
EDGVVMVATIAFGMGIDKPDVRFVAHIDLPKSVEGYYQETGRAGRDGEASIAWMAYGLGD
VVQQRRLIDQSPGDRTFKMRMGQHLDAMLALCETVACRRRNLLGYFGQDSEPCGNCDTCL
TPPDTWDGLIPAQKLLSTIVRLQRERNQSFGAGHLVDILRGASTERIRQQRHDELATYGL
GSDLSDQDWRSVIRQLLARGILVARGEYGVLAVGEAGAPVLKGEANVPLRRDVLGRGQNS
GGSRVRKSAAVEQVAESDRDLFEALRAWRAEQAREQGVPAYIVFGDATLRALADRRPRTS
ADLEGITGIGAKKREAYGDAVLAVVASH
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcgagagcagcagtcctgggatgccgatccctacgccgacctcgactggaacccc
gacgagttcgcaccgcccgaggatttcgacgcgccgccgccgcccgagttcgacggatac
ggcgctgccgtcgctcgcgccacccgcgaccgcgcatccgccggcgccgcgccgccgcgt
gccgcgccgccgcgtgccgtgccgaacgcggcccccgccgccgtcctctcgctcgagcgt
cgcgatttcaccggcgccgacccgcgcgccgtgctcaaggaggtcttcggctacgacgac
ttccgcggcgaccagggcgacatcgtctcgcacgtcatcggcggcggggatgccgtcgtg
ctcatgcccaccggcggcggcaagtcgatcacctaccaggtgcccgcgctcgtgcgcccg
ggaacgggactcgtcgtcagcccgctcatcgcgctcatgcacgaccaggtcgatgcgctg
atcgccaacggcgtgcgggcggcctacctcaactccacacagtctccgggtgagcgcgcc
ggtgtcgagcaggcgtacctcgcgggtcagctcgacctgctctacgtcgcccccgagcgt
ctgagcgtgccgcagacgacgcagctgctccagcggggcgccctgagcgtcatcgcgatc
gacgaggcgcactgcgtctcgcagtggggccacgatttccgtcccgattacctcgccctc
ggcgacctcgacgagcggttccccggggtgccgcggatggcgctcaccgccactgcgacc
cgcgcgacgcaccaggagctcaccgagcggctgcgcctgccgcaggcgcggcacttcgtc
gcgagcttcgaccgacccaacatccagtaccgcatcgagccgaaggtcgatccgcggcgg
cagctcgtcaccttcatccgctcgatgcccgagggatccgccggcatcgtgtacgcgctc
agccgcaagtcggtcgagcagaccgccgactacctcgccgcacagggtctcgacgccctg
ccgtaccacgcgggtcttccggccgagatgcgcgccaagcaccagtcgcggttcctccgc
gaagacggtgtcgtcatggttgccacgatcgcgttcggcatgggcatcgacaagcccgac
gtccggttcgtggctcacatcgatctgccgaagtctgtcgaggggtactaccaggagacc
gggcgcgccggacgcgacggcgaagcgtcgatcgcctggatggcctacggcctgggggat
gtcgtgcagcagcggcgcctcatcgatcagagccccggcgaccgcacgttcaagatgcgc
atggggcagcacctcgacgcgatgctcgccctctgcgagacggtcgcgtgccgtcggcgg
aacctgctcggctacttcggccaggactccgagccgtgcggcaactgcgacacctgcctc
acgccgcccgacacgtgggacggcctgatcccggcgcagaagctgctctcgacgatcgtg
cggctgcagcgcgagcgcaaccagtcgttcggcgccggccacctcgtcgacatcctgcgc
ggagcgtcgaccgagcgcatccggcagcagcgtcatgacgaactcgcgacgtacggcctc
ggctccgatctgtcagaccaggactggcgcagtgtcatccggcagctgctcgcccgcggc
atcctcgtcgctcgcggcgagtacggcgtgctcgcggtcggcgaggccggagcgccggtg
ctcaagggcgaggctaacgtccccctgcgccgcgacgtgctcgggcggggccagaacagc
ggcggctctcgcgtgcgcaagtcggccgcggtcgagcaggtcgccgagagcgatcgcgac
ctgttcgaggcgctgcgtgcctggcgtgccgaacaggcgcgcgagcagggcgttccggcc
tacatcgtcttcggtgacgcgacgctgcgcgcgctcgccgatcgccggccgcgcacctcg
gccgacctcgagggcatcaccggcatcggagccaagaagcgcgaggcctacggcgacgcg
gtgctcgccgtcgtggcatcccactga
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