Microbacterium plantarum: VC184_04080
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Entry
VC184_04080 CDS
T09931
Name
(GenBank) helicase HerA-like domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
mpln
Microbacterium plantarum
Brite
KEGG Orthology (KO) [BR:
mpln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpln03400
]
VC184_04080
DNA repair and recombination proteins [BR:
mpln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
VC184_04080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
ResIII
AAA_30
AAA_11
TrwB_AAD_bind
T2SSE
AAA_10
AAA_19
AAA_25
nSTAND3
AAA_7
FCH
AAA_6
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
WRK18952
LinkDB
All DBs
Position
860147..862024
Genome browser
AA seq
625 aa
AA seq
DB search
MPSDDAIAAADLARLRAEAEAAEAALVAARARAALAAAEAAAARAGSAPAGDSAPSAPTG
EPEPSAAGEAEPSGAAVPLDRSEVDDIRRGYTFDGPVLELGALLNGEPQRDALVRIPLAM
TNRHGLVAGATGTGKTRTLQVLVEQLAANGVPVFAADIKGDLSGLASAGEPSEKLLSRTS
AIGQDWSPRSFATEFLALGGRGAGTPVRATVSGFGPLLLSRVLGLNATQESSLGLVFHYA
DANGLALVDLADLRAVLTYLTSDDGKAELAELGGLSKATAGVILRELITFADAGADVFFG
EPEFDVRDLMRTTDAGEGIVTLLEVPGVADRPVLYSTFLMYLLAELFEVLPEVGDVDKPE
LVFFFDEAHLLFRDASKDFLAAVVQTVRLIRSKGVGVFFVTQTPKDVPSDVLAQLGSRVQ
HALRAFTPDDVKALRASVGTYPRSGYDLERVLQELGTGEAVVTVMNEKGAPTPVAWTRLR
APQASMSPAAVEDVQARVAASEIRPRYAEAVDRESAREILTARMNAAQAALDAAEAEAAR
RKAEQDAAKLRAKADAAYAKQLAAIRKQAAADEAKERRDDDRMLRSMTSNTRSRRRTPAE
QILGSRAAQEVLTGVIRGIFGTGRR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgccctccgacgacgcgatcgccgcagccgatctcgcacgactgcgtgcggaagcggaa
gccgctgaggccgcgctcgtcgccgcccgagctcgagccgccctggccgccgccgaggca
gccgccgcgcgagccgggtcggccccggccggggactcggcgccgtcggctccgaccggc
gaacccgagccgtcggcggccggggaagccgagccctccggggcggcggttccgctcgac
cgatccgaggtcgacgacatccgccggggctacacgttcgacggtcccgtcctcgagctc
ggggcgctcctgaacggcgagccgcagcgtgatgcgctcgtgcggatcccgctggcgatg
acgaatcgtcacggtctcgttgccggcgccactggcaccggcaagacccgcacgctgcag
gttctcgtggagcagctcgccgccaacggcgtgccggtgttcgcggccgacatcaagggc
gatctctcgggtctggcctcggcgggcgagccgagcgagaagctcctctcgcgaacgagc
gcgatcgggcaggactggtcgccgcgttctttcgcgaccgagttcctggcgctcggcggc
cgtggggcgggaacgccggtgcgcgcgaccgtctccggcttcggcccgctgctgctgagc
cgcgtgctcggactcaacgcgacccaggagtcgagtctcggtctcgtcttccactacgcc
gacgcgaacggcctggctctcgtcgacctcgccgatctgcgggcggtgctgacctacctc
acgagcgatgacggcaaagccgagctcgcggagctcggcggactctccaaggcgacggcc
ggcgtcatcctccgcgaactcatcaccttcgccgacgccggggcggacgtcttcttcggc
gaaccggagttcgacgtccgagacctgatgcggaccacggacgcgggcgagggcatcgtc
accctcctcgaggtgcccggtgtggccgaccgcccagtgctctactcgaccttcctgatg
tacctgctcgcggagctgttcgaggtgctgcccgaggtgggtgacgtcgacaagccggag
ctcgtgttcttcttcgacgaggcgcatctgctgttccgcgacgcgtcgaaggacttcctc
gccgcggtggtgcagacggtccggctcatccggtcgaagggtgtgggcgtcttcttcgtc
acgcagacgcccaaggacgtgccgtccgatgtgctggcgcagctcggctcgcgcgtacag
catgcgcttcgtgccttcaccccggatgacgtcaaggcgctgcgcgcgagtgtgggcacc
tacccgcgatcgggctacgacctggagagggttctgcaggagctcggcaccggcgaggcc
gtcgtcaccgtcatgaacgagaaaggtgcgcccacccccgtcgcgtggacacggctccgt
gcgccgcaggcgtcgatgtcgccggcagcggtggaggacgtccaggcccgggtggcggca
tccgagatccggccgcgttacgccgaggcggtcgatcgcgagtcggcgcgcgagatcctc
accgctcgcatgaacgccgcgcaggcggctctcgatgcggccgaggccgaggccgcgcgc
cgcaaggcagagcaggacgccgcgaagctgcgggcgaaggccgacgccgcctacgcgaag
cagctcgccgccatccggaagcaggccgcggccgacgaggcgaaggagcgacgcgacgac
gaccggatgctgcgcagcatgacctcgaacacgcgctcgcgccggagaacgccggcggag
cagatcctcggctcgcgcgcggcccaggaggtgctgaccggcgtcatccggggaatcttc
ggcaccggacggcgctga
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