KEGG   Microbacterium plantarum: VC184_04765
Entry
VC184_04765       CDS       T09931                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mpln  Microbacterium plantarum
Pathway
mpln03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpln00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VC184_04765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpln03019]
    VC184_04765
Messenger RNA biogenesis [BR:mpln03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     VC184_04765
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 YicC-like_C
Other DBs
NCBI-ProteinID: WRK18329
LinkDB
Position
1006916..1008592
AA seq 558 aa
MPTNVFSPPALEPGTLRVYPLGGLGEVGRNMTVFEYEGKLLVVDCGVLFPEEHQPGVDLI
LPDFEPIKHRLDDIVGVVLTHGHEDHIGAVPYLLKLKGDIPLIGSGLTLALIEAKLKEHR
IRPYTLTVTEGQEEQVGPFDLEFIAVNHSIPDALAVAVRTPAGLVLATGDFKMDQLPLDG
RITDLRAFARLGEEGVDLFLVDSTNADVPGFTPTERGIGPVLDQVISKSPRRVIVASFSS
HVHRVQQVVDAAAANGRRVAFLGRSMVRNMTIAENLGYLNVPDGVLIDYKKAKDLPDDRI
VYMSTGSQGEPMAVLSRMANLEHAIEPGPGDTVILASSQIPGNENAIYRVIDGLTKLGAN
VVHKGNAKVHVSGHAAAGELLYCYNILKPRNVLPVHGEYRHLMANAKLAQDTGVPEDRTI
LAENGTVVDLKDGVAEVVGQLDIGFVYVDGSTVGEITDADLKDRRILGEEGFISVIVVVD
GKTGRVVSGPDIHARGVAEDDAVFEGVKPKIAAALAEAVQSGTRDNHALSQVVRRTIGRW
VNQSLRRRPMIVPVVIEA
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgcccacgaacgtcttcagcccgcccgctctcgaacccggaacgctgcgggtgtacccg
ctcggaggcctcggcgaggtcggccggaacatgaccgtcttcgagtacgagggcaagctc
ctcgtcgtcgactgcggcgtgctcttccccgaggagcaccagccgggcgtcgacctgatc
ctgcccgacttcgagccgatcaagcatcgcctcgacgacatcgtcggtgtcgtcctgacc
cacggccacgaggaccacatcggggcggttccctacctgctcaagctcaagggtgacatc
cccctcatcggctcgggactcacgctcgccctcatcgaggcgaagctcaaggagcaccgc
atccgcccctacaccctgacggtcaccgaggggcaggaggagcaggtcggtccgttcgac
ctcgagttcatcgcggtcaaccactcgatccccgacgcgctcgcggtcgccgtccgtacc
cccgcggggctcgtcctcgcgacgggtgacttcaagatggatcagctcccgctcgacggc
cgcatcaccgacctgcgtgccttcgcgcgactgggcgaggagggcgtcgacctgttcctc
gtcgactccaccaacgcggacgtccccggcttcacgccgaccgagcgcggcatcggtccc
gttctcgaccaggtcatcagcaagtcgccgcgccgtgtcatcgtcgcgagcttctcgagc
catgtgcaccgcgtgcagcaggtcgtggatgccgcggccgcgaacggtcgccgcgtcgcc
ttcctcggccgcagcatggtccgcaacatgaccatcgccgagaacctggggtacctcaac
gtccccgacggcgtgctcatcgactacaagaaggccaaggacctgcccgacgatcgcatc
gtctacatgtcgacgggctcccagggcgagccgatggccgtgctctcgcgcatggccaac
ctcgagcacgcgatcgagcccgggccgggagacaccgtcatcctggcgtcgagccagatc
ccgggcaacgagaacgcgatctaccgcgtcatcgacgggctgaccaagctcggcgcgaac
gtcgtgcacaagggcaacgccaaggtgcacgtgtcgggacacgccgccgcgggcgagctg
ctgtactgctacaacatcctcaagccgcgcaacgtgctcccggtgcacggggagtaccgt
cacctgatggcgaacgcgaaactcgcgcaggacaccggcgttccggaggatcgcacgatc
ctggccgagaacggtaccgtcgtcgacctcaaggacggcgtcgcggaggtcgtcggccag
ctcgacatcggcttcgtgtacgtcgacggctcgaccgtgggcgagatcaccgacgccgat
ctcaaggaccgtcggattttgggcgaggaaggcttcatctcggtcatcgtcgtcgtggac
ggcaagacgggacgagtcgtgagcggcccggacatccacgcgcgtggtgtcgccgaggac
gacgcggtgttcgagggcgtcaagccgaagatcgcggctgcgctcgcggaggccgtgcaa
tcggggacgcgagacaaccacgcgctctcacaggtcgtccgccgcacgatcggccgctgg
gtgaaccagtcgctccgacgtcgcccgatgatcgtcccggtcgtcatcgaggcctga

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