Microbacterium plantarum: VC184_09745
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Entry
VC184_09745 CDS
T09931
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mpln
Microbacterium plantarum
Pathway
mpln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VC184_09745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpln03019
]
VC184_09745
03009 Ribosome biogenesis [BR:
mpln03009
]
VC184_09745
Enzymes [BR:
mpln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VC184_09745
Messenger RNA biogenesis [BR:
mpln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VC184_09745
Ribosome biogenesis [BR:
mpln03009
]
Prokaryotic type
rRNA helicases
VC184_09745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WRK16202
LinkDB
All DBs
Position
complement(2022152..2023978)
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AA seq
608 aa
AA seq
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MSTSAEQSVPESVDEPPVITFRDLGLGEQVLKALSDVGYETPSAIQAATIPTLLEGRDVV
GLAQTGTGKTAAFALPILDRLDLTQKTPQALVLAPTRELALQVCEAFEKYASRTKGVHVL
PVYGGQGYGVQLSALRRGVHVIVGTPGRIMDHLDKGTLDLSELKYLVLDEADEMLKMGFA
EDVETILADTPDTKQVALFSATMPAAIRRMSKQYLNDPEEITVASKTTTSSTITQRYLIV
SYQQKIDALTRILEVENFEAMIVFARTKSATEEVAEKLRARGYSAAAINGDVAQVQRERT
VNQLKSGKLDILVATDVAARGLDVERISHVVNFDISTDTESYVHRIGRTGRAGRTGDAIS
FVTPRERGLVNAIERATRQPLTQMQLPSVDEVNVTRLSRFDDRITAALEDTDRIERFRDI
VAHYVRHHDVPEVDVAAALAVVAQGETPLLLEPDPEPRARAPREDRAPRSFDRDDRDGRP
ERRPRASNPNMTTYRIAVGKRHRVEPRQIVGALANEGGLSRGDFGAIQIRPDFSLVELPS
DMPHSTLDRLADTRISGKAIEIRVDTGGPSRSSRGRFDRDDRPRDRDRDGDRDDRPARKP
RHRSETRD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgtccacttctgctgaacagtctgtacccgagtccgtcgacgagccgcccgtcatcact
ttccgcgacctcgggctgggagagcaggtgctcaaggcgctctccgacgtgggctacgag
accccgtcggcgatccaggccgcgaccatcccgacgctcctcgaggggcgcgatgtcgtc
ggcctcgcgcagaccggtaccggcaagaccgcggctttcgcgctgcctatcctcgaccgg
ctcgacctgactcagaagaccccgcaggccctcgtgctcgccccgacccgcgagctcgcg
ctgcaggtctgcgaggcgttcgagaagtacgcgtcgcgcacgaagggtgtccacgtcctc
ccggtctacggcggtcagggctacggcgtgcagctctcggcgctgcgccggggagtccac
gtcatcgtcggaacgcccgggcgcatcatggaccacctcgacaagggcacgctcgacctg
tccgagctgaagtacctcgtgctcgacgaggccgacgagatgctcaagatgggcttcgcc
gaggacgtcgagacgatcctcgccgacaccccggacaccaagcaggtcgccctgttctcc
gcaacgatgccggcggccatccgccgcatgtcgaagcagtacctcaacgaccccgaggag
atcacggtcgcgtcgaagacgacgacctcctcgacgatcacccagcgctacctgatcgtg
tcgtatcagcagaagatcgatgcgctcacccgcatcctcgaggtcgagaacttcgaggcg
atgatcgtcttcgcccgcacgaagagcgcgaccgaggaggtcgccgagaagctgcgcgcc
cgcggctactctgccgccgccatcaacggcgacgtggctcaggtgcagcgcgagcgcacc
gtcaaccagctgaagtcgggcaagctcgacatcctcgtcgccacggatgtcgctgcccgc
ggcctcgacgtcgagcgcatctcgcacgtggtcaacttcgacatctcgaccgacaccgag
tcgtacgtgcaccgcatcggccgcaccgggcgtgccggccgcacgggtgacgcgatcagc
ttcgtcacgccgcgcgagcgcgggctcgtgaacgcgatcgagcgcgcgacgcgccagccg
ctcacgcagatgcagctgccgagcgtcgacgaggtcaacgtcacgcgcttgtcgcggttc
gacgaccgcatcaccgctgcgctggaagacaccgaccgcatcgagcggttccgcgacatc
gtcgcccactacgtccgtcaccacgatgtgcccgaagtggacgtcgccgccgcgctcgcc
gtggtcgcgcagggcgagaccccgctgctgctcgagcccgaccccgagccgcgcgcacgc
gcgccgcgcgaggaccgtgccccgcgctcgttcgaccgcgacgaccgcgacgggcggccg
gaacgccgcccgcgtgcgagcaacccgaacatgacgacctaccgcatcgcggtgggcaag
cgccaccgcgtcgagccccgtcagatcgtcggggcgctcgcgaatgagggcggtctcagc
cgcggcgacttcggcgcgatccagatccgtcccgacttctcgctcgtcgagctgccgtcc
gacatgccccactcgacgctcgaccgcctggccgacacccgcatctcgggcaaggcgatc
gagatccgcgtcgacaccggcggcccgagccgcagctcgcgcggccgcttcgaccgcgac
gaccgaccgcgtgaccgcgaccgtgacggcgaccgcgacgaccggccggctcgcaagccc
cgccaccgctcggagacgcgcgactga
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