Methylorubrum populi: Mpop_0008
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Entry
Mpop_0008 CDS
T00760
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mpo
Methylorubrum populi
Pathway
mpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Mpop_0008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpo03400
]
Mpop_0008
Enzymes [BR:
mpo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Mpop_0008
DNA repair and recombination proteins [BR:
mpo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mpop_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
Helicase_RecD
HHH_2
AAA_29
AAA_22
HHH_3
nSTAND3
AAA_16
NTPase_1
TrwB_AAD_bind
UvrD-helicase
PIF1
MeaB
DEAD
AAA
HHH
AAA_28
CbiA
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ACB78204
UniProt:
B1ZE43
LinkDB
All DBs
Position
8864..11047
Genome browser
AA seq
727 aa
AA seq
DB search
MNAPVRPPDLDVLAGSVERVTFHSAETGFCVLKVHARGRRDLVPVVGHAPAIAAGEWLTA
AGRWTTDREHGLQFRAETLQVTPPTGIEGIERYLASGQMRGIGPMMAKRIVAAFGEAVFE
IIEAEPARLTEVEGIGRKRAARIVKGWAEQKAVREIMIFLHAHGVGTARATRIFRTYGGD
SLKVMAEDPYRLARDIRGIGFRTADSIALRLGLARDAPQRLAAGVSYALQKAMDEGHCGL
PVERLVRLAADLLEVAPDLVRVAAALVLREGREVVADTLRGEPCLFLKGLHGAERAIAMR
MVERATGAPPWPEIDFALARPWVEAKTGKTLSASQAEAVGLVLRSKLCVLTGGPGVGKTS
TLDAILRILTAKGVRVLLAAPTGRAAKRMAEQTGLEARTLHRLLEIDPRNGGFQRGEDNP
LDCDLLVIDETSMVDVPLMHAVLKAVPERAGLILVGDVDQLPSVGPGQVLADLIASGRVP
VARLTEIFRQAAQSRIVVNAHSINTGRMPVTAPKGEESDFYLVEIEDAEAGVETLIDLVT
RRIPRRFGLDPARDIQVLTPMIRGSLGSRNLNHALQRVLNPSPPAQVERFGWRFAPGDRV
METRNDYDRDVFNGDLGTVSAIDAEEEALVVDFDGRPVIYPFGELDTLVPAFATTIHKAQ
GSEYPAVVIPVVTQHRTMLARNLLYTGVTRGRRLVVLVGQRRAVGLAIREGAARRRWTKL
REWLETA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccggtgcggccacccgacctcgacgtgttggcgggctcggtcgagcgcgtc
actttccacagcgccgagacgggattctgcgtcctgaaggtccatgcccgcggccggcgc
gatctcgtgccggtggtgggccatgcgccggccattgccgcgggcgagtggctgacggcg
gcgggccgctggaccacggatcgcgagcacggcctccagttccgcgccgagacgctccag
gtcacaccgccgaccggcatcgaggggatcgaacgttatctcgcctcggggcagatgcgc
ggcatcggcccgatgatggccaagcgcatcgtcgcggccttcggcgaggcggtgttcgag
atcatcgaggccgagcccgcccgcctcaccgaggtcgagggcatcggccgcaagcgcgcc
gcccgcatcgtcaagggctgggccgagcagaaggcggtgcgggagatcatgatcttcctg
cacgcccacggcgtcggcaccgcgcgggcgacccgcatcttccgcacctatggcggcgat
tcgctgaaggtcatggcggaggatccgtaccgcctcgcccgcgacatccgcggcatcggc
ttccgcacggcggattccatcgcactgcgcctcggcctcgctcgcgacgcgccgcagcgg
ctcgccgcgggcgtgtcctacgcgcttcagaaggcgatggacgagggccattgcgggttg
cccgtcgagcggctggtgcggctcgccgccgatctcctcgaagtggcgcccgacctcgtc
cgggtcgcggccgcgctcgtcctgcgtgagggccgcgaggtcgttgccgacaccctgcgc
ggcgagccctgcctgttcctgaagggactgcacggcgccgagcgcgccatcgccatgcgg
atggtcgagagggcgacgggagcgccgccctggccggagatcgatttcgccctcgctcgc
ccctgggtcgaggcgaagaccggcaagacgctctcggcctcgcaggccgaggcggtcggg
ctcgtgctgcgctcgaagctctgcgtgctcaccggcggtcccggcgtcggcaagacctcc
accctcgacgcgatcctgcgcatcctcacggccaagggcgtgcgcgtgctgctcgccgcg
cccaccggccgcgccgccaagcgcatggccgagcagaccgggctggaggcccgcaccctc
caccgcctgctggagatcgacccgcgcaacggcggcttccagcgcggggaggacaacccg
ctcgattgcgatctcctcgtcatcgacgagacctcgatggtcgacgtgccgctgatgcat
gccgtgctcaaggcggtgccggagagggccggcctgatcctcgtcggcgacgtcgatcag
ctgccctccgtcggccccgggcaggtgctcgccgacctgatcgcgtccggccgcgttccg
gtggcccgcctgaccgagatcttccgccaggcggcgcagagccggatcgtcgtcaatgcc
cacagcatcaacaccggccgcatgccggtcacggcgccgaagggggaggagagcgacttc
tacctcgtggagatcgaggatgccgaggcgggcgtggagacgctgatcgacctcgtgacc
cgccgcatcccgcgccgcttcggcctcgatccggcccgcgacatccaagtgctgacgccg
atgatccgcggctcgctcggcagccgcaacctcaaccacgccctccagcgcgtgttgaat
ccctcccccccggcgcaggtggagcgcttcggctggcgcttcgcccccggcgaccgagtg
atggagacccggaacgactacgaccgcgacgtgttcaacggcgatctcggcacggtgagc
gccatcgacgcggaggaggaggcgctcgtggtcgatttcgacggtcggccggtgatctac
ccgttcggcgaactcgacacgctggtgccggccttcgccacgacgatccacaaggcgcag
ggttcggaatacccggccgtggtgatcccggtggtcacgcagcaccgcacgatgctcgca
cgcaacctcctctataccggcgtgacccgcgggcgccgtctcgtcgtgctcgtgggtcag
cgccgggcggtcggcttggcgatccgcgagggcgcggcgcggcggcgctggaccaagctg
cgggaatggctcgagaccgcctga
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