Methylorubrum populi: Mpop_0398
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Entry
Mpop_0398 CDS
T00760
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mpo
Methylorubrum populi
Pathway
mpo03420
Nucleotide excision repair
mpo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mpop_0398
03430 Mismatch repair
Mpop_0398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpo03400
]
Mpop_0398
Enzymes [BR:
mpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mpop_0398
DNA repair and recombination proteins [BR:
mpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mpop_0398
MMR (mismatch excision repair)
Other MMR factors
Mpop_0398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
DUF3553
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACB78576
UniProt:
B1ZI90
LinkDB
All DBs
Position
426078..428474
Genome browser
AA seq
798 aa
AA seq
DB search
MMQEPHDAPGAFRPRPSDDEAPSAPTSIAARAMAALRPEGASYLSGLNPEQRRAVEATEG
PVLVLAGAGTGKTRVLTTRIAHLIATGKARPYDILSVTFTNKAAREMKHRIGGLIGPAGE
GMPWLGTFHAIGTKILRRHAELVGLKSDFTILGTDDQLRLMKQVIADQNIDEKRWPARSL
AHTIDGWKNRGLSPEQVPPGEAQAFAFGKGGQLYAAYQARLATLNAVDFGDLLLLCLKLW
RENPDILANYQDRFRYILVDEYQDTNVAQYLWLRLLAQARKNVACVGDDDQSIYGWRGAE
VDNILRFEHDFPGATVVRLERNYRSTGHILAAASGLIAKNEGRLGKTLRTEDEAGEPVTV
TGAWDSEEEARQVAESIESLQRRGHPLSEIAVLVRISAQMREIEDRFVQVGLPYRVIGGP
RFYERAEIRDALAYLRVTMNGADDLAFERIFNTPKRGLGDATLQTLHAFARADRIPLLAA
AGKLIETDELKPRARSMLRGLVESFSRWVRLVGTKPHPEVAQTILEESGYTEMWQKDRSA
DAAGRLENLKEFVRSMEEFPDMAAFLEHVSLVMEASEAEGADRVSLMTLHAAKGLEFDTV
FLPGWEDGLFPNQRAIDESGRAGLEEERRLAHVGLTRARKRAKLSFAVNRRIHGLWSSTI
PSRFIDELPPQAVDVIEAPAHFSAGASRFDRNPAPFGSSYGTPGWQRAQANTSGGFGGGG
SQGRSEGRGGGRSSGPREIEGELVAKSTGAPSAFEHGQRVFHTKFGPGTVAGVDGNKLTV
DFDKAGRKMVLDSFLQPG
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagagccccacgacgcgcccggcgcgttccggccgcgcccgtccgacgacgaa
gcgccgtcggctccgacctccatcgctgcccgtgccatggccgccctgcggcccgagggc
gcctcctatctctccggcctgaacccggagcagcgccgcgccgtggaggcgacggagggg
cccgttctcgtgctggccggtgccggtaccggcaagacgcgggtgctgacgacgcgcatc
gcccacctgattgccaccggcaaggcgcggccctacgacatcctctcggtgaccttcacc
aacaaggccgcccgggaaatgaagcaccgcatcggcgggctcatcggcccggcgggcgag
ggcatgccctggctcggcaccttccacgccatcggcaccaagatcctgcgccgccacgcc
gagctggtcggactgaaatccgacttcaccatcctcggcactgacgatcagcttcgcctg
atgaagcaggtcatcgccgaccagaacatcgacgagaagcgctggcccgcgcgctcgctc
gcccacacgatcgacggctggaagaaccggggtctctcccccgagcaggtgccgccgggc
gaggcccaggccttcgccttcggcaagggcgggcagctctacgccgcctatcaggcccgg
ctcgccaccctcaacgcggtcgatttcggcgaccttctgctgctctgcctgaaactgtgg
cgcgagaacccggacatcctggccaattaccaggaccggttccgctacatcctcgtggac
gagtaccaggacaccaacgtcgcccagtatctctggctcaggctgctggcccaggcgcgc
aagaacgtcgcctgcgtcggcgacgacgatcagtcgatctatggctggcgcggcgccgag
gtcgacaacatcctgcgcttcgagcacgacttccccggcgccaccgtggtgcgtcttgag
cggaactaccgctcgaccggccacatcctcgccgccgcctccggcctgatcgccaagaac
gagggccgcctcggcaagacccttcgcacggaggacgaggccggcgagccggtcaccgtg
accggcgcctgggattcggaggaagaggcgcgccaggtcgccgaatcgatcgagtcgctc
cagcgccgggggcacccgctctcggagatcgccgtgctggtgcggatctcggcgcagatg
cgcgagatcgaggatcggttcgtgcaggtcggcctgccctatcgggtcatcggcggcccg
cgcttctatgagcgggcggagatccgcgacgcgctggcctatctacgggtcaccatgaac
ggcgccgacgacctcgctttcgagcgcatcttcaacacgcccaagcgcggcctgggcgac
gccaccctccagaccctgcacgccttcgcccgcgccgaccggatccccctcctggccgcg
gccgggaagctgatcgagaccgacgagctgaagccccgcgcccgctcgatgctgcgcggc
ctcgtcgagagcttttcgcggtgggtgcggctggtggggaccaagccccatccggaggtc
gcgcagaccatcctggaggaatccggctacaccgagatgtggcagaaggaccgctcggcc
gacgccgccgggcggctcgaaaacctcaaggaattcgtccgctcgatggaggagttcccc
gacatggcggccttcctcgaacatgtctccctcgtcatggaggcctccgaggcggaaggc
gccgaccgcgtctcgctgatgacgctgcacgccgccaaggggctcgaattcgacaccgtg
ttcctgcccggctgggaggacggcctgttcccgaaccagcgcgccattgatgaaagcggc
cgggccggcctggaagaggagcggcgtctcgcccatgtcgggctcacccgggcccgcaag
cgcgccaagctttcgttcgccgtcaaccggcgcattcacggcctgtggtcctcgaccatc
ccgtcgcgcttcatcgacgagttgccgccgcaggccgtggacgtgatcgaggcgcccgcg
catttctcggcgggcgcctcgcgcttcgaccgcaacccggccccgttcggctcgtcctac
ggcacgccgggctggcagcgggcgcaggccaacacctcgggcgggttcggcgggggcggc
agccaagggcgctccgaagggcgcggcggcgggcgctcgagcggcccccgggagatcgag
ggcgagttggtcgccaaatcgaccggcgcgccctccgccttcgagcacggccaacgggtc
ttccacaccaagttcggccccggcaccgtggccggcgtcgacggcaacaagctcaccgtt
gacttcgacaaggccggccggaagatggtgctcgacagcttcctccagcccggttga
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