Methylorubrum populi: Mpop_0401
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Entry
Mpop_0401 CDS
T00760
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mpo
Methylorubrum populi
Pathway
mpo03030
DNA replication
mpo03430
Mismatch repair
mpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mpop_0401
03430 Mismatch repair
Mpop_0401
03440 Homologous recombination
Mpop_0401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpo03032
]
Mpop_0401
03400 DNA repair and recombination proteins [BR:
mpo03400
]
Mpop_0401
Enzymes [BR:
mpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mpop_0401
DNA replication proteins [BR:
mpo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mpop_0401
DNA repair and recombination proteins [BR:
mpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mpop_0401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ACB78579
UniProt:
B1ZI93
LinkDB
All DBs
Position
complement(430634..431527)
Genome browser
AA seq
297 aa
AA seq
DB search
MSVVAIDFETANERRDSACAVGLAWIEGGRVVRRETRLIRPPQMRFSPGNIRIHGILPAD
VRDAPTFPEVFAEFRPDLTGALLLAHNAGFDMGVLAASLAAWGEPVPDMAGHCTLQIARR
IFPDPAGHGLAKVAGRLGIRFEHHDAGEDAFACAEIALAALRETGAADIADLARGLGLMP
IRAVAGPRRDFTRSTSAHALRASGIVDLRPKGELRFAMRGSTGNRYVLEFEERTDGPYLR
CSCPAGTHRRRCRHVDALVEGDITDLTSNNVDDVERLRQLLDGKSVGPLRTKGVAAA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgtcgcgatcgatttcgagaccgccaacgagcgacgcgacagcgcctgcgcg
gtcggtctcgcctggatcgagggcggccgcgtggtgcggcgcgagacgcggctgatccgc
ccgccgcagatgcggttctcacccggcaacatccgcatccacggcatcctgccggcggat
gtgcgcgacgcgccgacatttcccgaggtcttcgccgagttccggccggacctgaccggc
gcgctgctgctcgctcacaatgccggcttcgatatgggcgtgctggccgcctcgctcgcc
gcctggggcgagccggtgccggacatggccggccactgcaccctgcagatcgcccggcgg
atcttccccgatcccgccggccacggcctcgccaaggtggcggggcgcctcggcatccgc
ttcgagcaccacgatgccggcgaggacgccttcgcctgcgccgagatcgcgctggcggcc
ctgcgcgagaccggtgcggccgacatcgccgatctcgcccgcggcctcgggctgatgccg
atccgcgcggtggccggtccgcggcgcgacttcacccgttcgacatcggcccatgccctg
cgggcctccggcatcgtcgatctgcggcccaaaggtgagctgcgcttcgccatgcgcggc
agcaccggcaaccgctacgttctcgaattcgaggagcggacggacgggccgtatctccgc
tgctcgtgtccggcaggcacgcatcgccgccgctgccgccacgtcgatgcgctggtcgag
ggcgacatcaccgatctcacctcgaacaacgtcgacgatgtcgagcgcctgcgccagttg
ctggacggcaagtccgtcgggccgctgcgaacgaagggcgtcgccgcggcttga
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