Methylorubrum populi: Mpop_1004
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Entry
Mpop_1004 CDS
T00760
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mpo
Methylorubrum populi
Pathway
mpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mpop_1004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpo03019
]
Mpop_1004
Messenger RNA biogenesis [BR:
mpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Mpop_1004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
rve
Motif
Other DBs
NCBI-ProteinID:
ACB79180
UniProt:
B1ZA31
LinkDB
All DBs
Position
complement(1066570..1068243)
Genome browser
AA seq
557 aa
AA seq
DB search
MTTRQDELVFVPLGGVGEIGMNAGLYGIGPEKQRKWIMVDCGMGFAGEEGLPGIDLMFPD
LTFIEERKKDLLGIFITHAHEDHIGAISELWPRIKAPVYATRFAKNLLETRRLSEPGAPK
VDLREIKPGRRVTVGPFEIEFVPVAHSIPESNAVAIRTEHGLVLHTGDWKLDDTPVAGDS
TSPEAFTALGDEGILALVCDSTNVLREGRSPSETEVSATLRKLIENVPHRVAVTTFASNV
ARIRAVAEAAQACGRQVIAVGRAMDRVIDVARECGYLDGLPDFLSADSYSHLPRDKVVCL
LTGSQGEPRAAMSRVSRHDHPAISLTAGDRVIFSSRAIPGNERDVGAIINDLIEDGIEVI
TDRTELVHVSGHPRREEMVAMYSWTRPKAVVPVHGEALHLDEHARFARSQGVESVVKARN
GAVVRLAPGKPEVVEHVRAGRLYKDGNVLIDSKDRAIPERRKLSQTGIVSVALAIDERGE
MAGEPAVDIMGLPNRGRGGEPLLDTVVDTVNRTINGLSRGKMKDSEAVENAVDRAVRSAV
NEAWGKKPACHVQVVEV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacggcaggacgaactcgtcttcgtgccgctcggcggcgtgggcgagatcggg
atgaacgcgggcctctacgggatcggaccggagaagcagcgcaagtggatcatggtcgat
tgcgggatggggtttgccggcgaggaaggcttgcccggcatcgatctgatgttccccgac
ctcaccttcatcgaggagcgcaagaaggaccttctcggcatcttcatcacccacgcgcac
gaggaccatattggcgcgatctcggaactgtggccgcggatcaaggccccggtctacgcc
acgcggttcgccaagaacctgctggagacccgccgcctctccgagcccggcgcgccgaag
gtcgatctgcgcgagatcaagccgggccggcgcgtgacggtcgggccgttcgagatcgag
ttcgtgccggtggcgcactcgatcccggaatcgaacgcggtggcgatccgcaccgagcac
ggtctcgtgctgcataccggtgactggaagctcgacgacacgccggtcgccggcgactcg
acctcgcccgaggccttcaccgcgctcggcgacgagggcatcctggcgctcgtctgcgac
tcgaccaacgtgctgcgcgagggccgctcgccgagcgagaccgaggtctccgcaacgctg
cgcaagctgatcgagaacgtgccccaccgcgtcgcggtgacgaccttcgcctccaacgtc
gctcgcatccgtgccgtggcggaggccgcccaggcctgcggccggcaggtgatcgcggtc
ggacgcgccatggaccgggtgatcgatgtcgcccgcgagtgcggttatctcgacggtctg
ccggacttcctctcggccgattcctactcgcacctgccgcgcgacaaggtggtctgcttg
ctcaccggttcgcagggcgagccgcgggcggcgatgtcgcgggtctcgcgccacgaccat
ccggcgatctcgctgacggccggcgaccgggtgatcttctcctcgcgcgccattcccggc
aacgagcgcgatgtcggcgctatcatcaacgacctgatcgaggacggcatcgaggtcatc
accgaccgcaccgaactcgtccacgtctccggccatccgcgccgggaggagatggtggcg
atgtattcgtggacgcggccgaaggcggtggtgccggtccatggcgaggcgctgcacctc
gacgagcacgcgcgcttcgcccgctcgcagggcgtcgagtcggtggtgaaggcccgcaac
ggcgcggtggtccgcctcgctccgggcaagccggaggtggtcgagcacgtccgcgccggc
cggctctacaaggacggcaacgtcctcatcgactccaaggaccgggcgatcccggagcgg
cgcaagctctcgcagaccggcatcgtctcggtggcgctcgccattgacgagcgcggcgag
atggccggtgagccggcggtggacatcatgggcctgcccaatcgcgggcgcggcggcgag
cccttgctcgacaccgtggtcgatacggtcaaccggacgatcaacggcctgtcgcgcggc
aagatgaaggactcggaggccgtggagaacgcggtcgatcgcgccgtgcgctccgccgtc
aatgaggcctggggcaagaagcccgcctgccacgtgcaggtggtggaggtgtga
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