Methylorubrum populi: Mpop_2425
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Entry
Mpop_2425 CDS
T00760
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mpo
Methylorubrum populi
Brite
KEGG Orthology (KO) [BR:
mpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpo03016
]
Mpop_2425
Enzymes [BR:
mpo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Mpop_2425
Transfer RNA biogenesis [BR:
mpo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mpop_2425
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACB80587
UniProt:
B1ZA77
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All DBs
Position
2635688..2636317
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AA seq
209 aa
AA seq
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MSAASSRIRLHRGDLPLDFAPGAAIAIDTETLGLNPHRDRLCVVQISRGDGSADVVQIRP
GDPAPERLKAVLADPQIVKIFHFARFDLAVLFKAFGVMPMPVYCTKVASKLARTYTDRHG
LKDVVRELVGVDLSKQQQSSDWGAEALSQAQIDYAASDVLHLHAARERLDAMLAREGRTE
MAQACFDFLPTRAKLDLAGWPEMDIFAHT
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgccagctcccggatccgcctccatcgcggcgacctgccgctcgatttcgcg
cccggcgcggcgatcgccatcgacaccgagacgctggggcttaatccgcaccgcgaccgg
ctctgcgtcgtgcagatctcccgcggcgacggcagcgccgacgtggtgcagatccggccc
ggcgacccggcgccggagcggctcaaggcggtcctggccgacccgcagatcgtcaagatc
ttccacttcgcccggttcgatctcgcggtgctgttcaaggcgttcggcgtgatgccgatg
ccggtctactgcaccaaggtcgcctccaagctcgcccggacctacaccgaccggcacggc
ctgaaggacgtggtgcgcgaactcgtgggcgtcgatctctccaagcagcagcaatcctcc
gactggggcgccgaggccttgagccaggcgcagatcgactacgccgcctccgacgtgctg
cacctgcatgccgcccgcgagcgcctcgacgcgatgctcgcccgcgaggggcgcaccgag
atggcgcaggcctgcttcgatttcctgccgacgcgggcgaagctcgatctcgccggctgg
ccggagatggatatcttcgcccacacatga
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