Methylorubrum populi: Mpop_2885
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Entry
Mpop_2885 CDS
T00760
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mpo
Methylorubrum populi
Pathway
mpo03410
Base excision repair
mpo03430
Mismatch repair
mpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mpop_2885
03430 Mismatch repair
Mpop_2885
03440 Homologous recombination
Mpop_2885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpo03400
]
Mpop_2885
DNA repair and recombination proteins [BR:
mpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mpop_2885
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mpop_2885
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mpop_2885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ACB81040
UniProt:
B1ZEH6
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All DBs
Position
3104106..3105941
Genome browser
AA seq
611 aa
AA seq
DB search
MLALVSAAMSLASPLDRPRPFLDVTASVLGRPWCERCGDPGQQALATTMTQAYGLPDLLA
RVLVGRGVGPAEAEAYLSPRLRDLMPDPSVLVDMEAAVDRLAHAVRSREAVAIFGDYDVD
GASSAALLADYLRALGVPVRIHIPDRITEGYGPNVGAVTALRGEGAGLLVCVDCGTAGHE
PLAAAAALGLDVIVLDHHGAPEELPATRALVNPNRLDDLSGLGHLCAAGVVFMTLVALAR
RLRGEGVFASAAEPRLTDFLDLVALATVADVVPLVGLNRAFVMQGLAVMRARGRPGLAAL
LDAAGLSEPPEAWHLGFLVGPRINAGGRIGDAGLGARLLTTADSMEARRIADELDRLNRE
RQAIEAQAVAEAEAEMDARLAGDPDRPVLIAASPEWHPGIVGLIAARLKERFGRPAFAFA
VKPDGSAVGSGRSVVGADLGGAVRDAVAAGLAVKGGGHAMAAGVTLPPGGLAAFGESLAR
DLTEAVGQARAAEALLIDGTVSAGGATAELVRLIQRAGPFGQGAPEPVMALPRHRVVDAG
VVGNGHVRARLVSGDGQAVGAIAFRAAQGPLGVALLGGIGRSFHVAGTLSCDRWRGAERA
QVRICDVAPCG
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccctcgtgtccgccgccatgtccctcgcttcccccctcgatcggccgcggccg
ttcctcgatgtcaccgcctcggtgctcgggcggccctggtgcgagcgctgcggcgatcca
ggtcagcaagccctcgcgacaacgatgacacaggcctacggcctgccggacctgctcgcc
cgcgttctcgtcgggcgcggcgtcgggccggcggaggccgaagcctatctgtccccgcgc
ctgcgcgacctgatgccggatccctccgtcctcgtggacatggaggcggcggtggatcgc
ctcgctcacgccgtgcggagccgcgaggcggtggcgatcttcggtgattacgatgtcgat
ggcgcgtcgagcgcggctctgctcgccgattacctgcgggcgctcggcgtgccggtgcgc
atccacattcccgaccgcatcaccgagggctacggtcccaatgtcggggccgtcacggcc
ctgcgcggggagggggcgggcctgctcgtctgcgtcgattgcggcaccgccggccacgaa
ccgctggccgccgccgcggcgctcggcctcgacgtgatcgtgctcgatcatcacggcgcc
ccggaagagcttccggcgacgcgggccctggtcaatccgaaccggctcgacgacctgtcc
ggcctcggccatctctgcgcggcgggcgtcgtgttcatgaccctcgtcgccctcgcccgg
cggttgcggggggagggcgttttcgcatccgccgccgagccgcggctcaccgacttcctc
gacctcgtggcgctcgccaccgtcgccgacgtggtcccgctcgtcggcctcaaccgcgcc
ttcgtcatgcagggtctcgcggtgatgcgcgcgcgcgggcggccggggctcgcggctctc
ctcgacgccgccgggctcagtgagccgccggaggcgtggcatctcggctttctcgtgggg
ccgcgcatcaatgccggcgggcggatcggcgatgccgggctcggcgcgcgcctgctcacc
accgccgactcgatggaagcccggcggatcgccgacgaactggaccggctcaaccgtgag
cgtcaggcgatcgaggcgcaggcggtcgccgaggccgaggccgagatggatgcgcgcctc
gcgggcgaccccgatcgccctgtgctcatcgccgcttcgcccgaatggcatcccgggatc
gtcggcctcatcgccgcccggctcaaggagcggttcggccggccggccttcgccttcgcg
gtcaagcccgacgggagtgccgtcggctccggccgctcggtcgtgggagcggatctcggc
ggcgccgtgcgcgatgccgtcgctgcgggcctcgcggtcaagggcggcggacacgcgatg
gccgcgggcgtgacgcttccacccggcggcctcgcggccttcggcgaaagcttggcccgc
gacctcaccgaagcggtcggccaggctcgtgcggccgaggcgctgctgatcgacggcacg
gtgagcgccggcggcgcgaccgcggagctggtccgcctgatccagcgggcaggtcctttc
gggcagggggcgcctgagccggttatggcgctgccccggcaccgcgtcgtcgatgcgggg
gtcgtcggcaacggccatgtccgtgcccgcctcgtcagcggcgacggtcaggccgtcggc
gccatcgccttccgcgccgcccagggaccgctcggtgtcgccctgctcggcggtatcgga
cgcagcttccacgtcgccggaacgctctcctgcgaccgctggcgcggcgcggagcgggcc
caggtccgaatctgcgacgtggcgccctgtggatag
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