Methylorubrum populi: Mpop_4528
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Entry
Mpop_4528 CDS
T00760
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mpo
Methylorubrum populi
Pathway
mpo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mpop_4528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpo03400
]
Mpop_4528
Enzymes [BR:
mpo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Mpop_4528
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Mpop_4528
DNA repair and recombination proteins [BR:
mpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mpop_4528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ACB82626
UniProt:
B1ZGU8
LinkDB
All DBs
Position
4835186..4836076
Genome browser
AA seq
296 aa
AA seq
DB search
MPELPEVETVRRGLAPAMVGARFARVTLRRPNLRFPFPERFAERLEGTTVRELARRAKYL
TAHLDSGESLILHLGMSGRFDVRMPDGSNLSPGDFYLEGALGTPKHDHVVMAFANGATVT
YNDARRFGFMDLVATRDLETCRHFAAMGVEPLSDALDGAVLARLFARKITPLKAALLDQR
LIAGLGNIYVCEALHRSGLHPALPAGALAKPDGAPTPKAKKLVKEIKAVLTEAVAAGGST
LRDYARPDGERGAFQHGFRVYDRVGHACPTKGCTGRIGRIVQGGRSTFFCETCQVR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgagaccgtgcgccggggcctggcccccgcgatggtcggc
gcgcgcttcgcccgcgtgaccctgcgccggccgaacctgcgcttccccttccccgagcgc
ttcgccgagcggctggagggcacgaccgtgcgggaactggcgcgccgggcgaaatacctc
acggcgcatctcgattccggcgagagcctgatcctgcatctcggcatgagcgggcgcttc
gacgtgcggatgcccgacggctcgaacctctcgccgggcgacttctacctcgaaggggcg
ctcggcacgcccaagcacgaccacgtggtgatggccttcgccaatggcgccaccgtcacc
tacaacgacgcccgccgcttcggcttcatggacctcgtggccacgcgcgatctcgaaacc
tgccgccatttcgcggcgatgggcgtcgagccgctctccgatgcgctcgacggtgcggta
ctcgcgcgcctgttcgcgagaaaaatcacgccgctgaaggccgcgctcctcgaccagcgc
ctgatcgcgggcttaggcaacatctatgtctgcgaggcgctgcaccgctccggcctccac
ccggccctgccggcgggcgcgcttgccaagcccgacggcgccccgacgccgaaggcgaag
aaactcgtcaaggagatcaaggcggtgctcaccgaggcggtggcggcggggggctccacc
ctccgcgactacgcccggccggacggggagcgcggcgccttccagcacggcttccgcgtc
tacgaccgggtgggccatgcctgcccgaccaagggctgcaccgggcggatcggccggatc
gttcagggcggacgctcgacgttcttctgcgagacctgtcaggtccgatag
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