Methylorubrum populi: Mpop_4537
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Entry
Mpop_4537 CDS
T00760
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
mpo
Methylorubrum populi
Pathway
mpo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mpop_4537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpo03400
]
Mpop_4537
DNA repair and recombination proteins [BR:
mpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mpop_4537
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mpop_4537
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
SWI2_SNF2
Microtub_bd
Kinesin
UB2H
DUF2963
Motif
Other DBs
NCBI-ProteinID:
ACB82635
UniProt:
B1ZGV7
LinkDB
All DBs
Position
complement(4843345..4846113)
Genome browser
AA seq
922 aa
AA seq
DB search
MPASKTPRVSPAEATAKATSKAASKAPAKLTSKTTAKADRPELMPLDEHLAALLNPALNR
NRPKAIEPVPPPEPARKGRSAKGEAKAYKKIAQDGFAEAPQAGFAIGDAADVDPRLAQAL
GLVPPDDGPAPEAAPDAEAPSLATEGVSATVEALEKLLTEGNPLFKNGEAWVPHRPERPA
KSEGGVKFTLKSDFTPAGDQPTAIAALVEGVKSAERDQVLLGVTGSGKTFTMAKVIEETQ
RPALILAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPRSDTFIEKESSINE
QIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYTAMSFTVSLGERIEQRQLIADLV
ALQYKRIQSDFARGTFRVRGDVIELWPAHLEDRGWRIGLFGDEVESIVEFDPLTGKKLNE
LKFVKVYANSHYVTPRPTLQQAIKGIKTELKQRVEELTRMGRLIEAQRLEQRCTFDIEMI
EATGACNGIENYSRYLTGRKPGEPPPTLFEYLPDNALVFTDESHVTVPQIGGMYRGDFRR
KATLAEYGFRLPSCLDNRPLRFEEWDAMRPQSVHVSATPAKWEMERTAGVFAEQVIRPTG
LVDPVIEIRPARSQVDDLLGEVRAVAQAGYRTLVTTLTKRMAEDLTEYLHENSVRVRYMH
SDIDTLERIEIIRDLRLGAFDVLIGINLLREGLDIPECALVAILDADKEGFLRSETSLIQ
TIGRAARNADARCILYADTITGSMERAMAETERRRQKQLAYNAEHGITPQSVKRGIADIL
ESVYERDHVRVDTGLAKDAITVGHNLKAVMADLEKRMRAAAADLDFEEAARLRDELKRLQ
ATELMVSDDPMARQGDVEREAGRYGQKGSRIAKPTLDNMGPGTDRELPAGAVPWQERPKA
RSTQGLGGQKPRYKGGGGRKRG
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcatccaagacaccgcgcgtgagccccgccgaagccacggccaaggcaacttcg
aaggcagcctcgaaggcgcctgcgaagttgacgtccaagacgacggcgaaggccgaccgg
ccggagctgatgccgctcgacgagcatctcgccgcgctgctcaacccggccctcaaccgc
aaccgtccgaaggcgatcgagccggtgcccccgccggagccggcccggaaagggcgcagc
gccaagggcgaagcgaaagcctacaaaaaaatcgcgcaggacggcttcgccgaggcaccg
caggcaggcttcgccatcggcgacgcggccgatgtcgatcccaggctcgcccaggcgctc
ggcctcgtcccgcccgacgacggaccggcgccggaggccgcgccggacgcggaggcgccc
tcgctggcgacggagggtgtctcggccacggtcgaggccctggaaaagctgctcaccgag
ggcaacccgctgttcaagaacggcgaggcctgggtgccgcaccggcccgagcgcccggcc
aagtccgagggcggcgtcaagttcacgctgaaatccgacttcacccccgccggcgatcag
cccaccgccatcgccgccctggtcgagggcgtgaagtcggccgagcgcgatcaggttctg
ctcggggtcaccggctccggaaagaccttcacgatggccaaggtcatcgaggagacgcag
cgcccggcgctcatcctcgcgccgaacaagacgctcgccgcccagctctacggcgagttc
aagagtttctttccggacaacgcggtcgagtatttcgtctcgtactacgactactaccag
cccgaggcctacgttccgcgctcggacaccttcatcgagaaggaatcctcgatcaacgag
cagatcgaccggatgcgccactcggccacccgcgccctgctggagcgggacgacgtcatc
atcgtcgcctcggtctcgtgcatctacggtatcggctcggtcgagacctacacggcgatg
tcgttcaccgtctcgctcggcgagcggatcgagcagcgccagctcatcgccgacctcgtg
gcgcttcagtacaagcggattcagtcggacttcgcccgcggcacgttccgcgtgcgcggt
gacgtgatcgaactctggccggcccacttagaggatcgcggctggcgcatcggcctgttc
ggcgacgaggtggagtcgatcgtcgagttcgatccgctgaccggcaagaagctcaacgag
ctgaagttcgtcaaagtctacgcgaattcgcactacgtcacgccgcgtccgacgctgcag
caggcgatcaagggcatcaagacggaattgaagcagcgcgtcgaggagctgacccggatg
ggccgcctcatcgaggcgcagcggctggagcagcgctgcaccttcgacatcgagatgatc
gaggcgaccggcgcctgcaacggcatcgagaactattcgcggtatctgacggggcgcaaa
cccggcgagccgccgccgaccctgttcgagtacctgcccgacaacgccctcgtcttcacc
gacgagagccacgtcaccgtgccccagatcggcggcatgtatcgcggcgacttccgccgc
aaggcgaccctggccgaatacggcttccgcctgccctcctgcctcgacaaccgccccctg
cggttcgaggaatgggacgcgatgcgcccgcaatcggtccacgtctcggcgaccccggcc
aagtgggagatggagcgcacggcgggcgtcttcgccgagcaggtgatccgccccaccggc
ctcgtcgatccggtgatcgagatccgcccggcgcgctcccaggtggacgatcttctggga
gaagtccgcgcggtggctcaggcgggttatcgcacgctcgtcaccacgctgaccaagcgc
atggccgaggacctgaccgagtacctgcacgagaactcggtgcgggtgcgctacatgcac
tccgacatcgacaccctggagcgcatcgagatcatccgcgatctccggctcggcgccttc
gacgtgctgatcggcatcaacctgctgcgcgagggcctcgacatccccgaatgcgcgctg
gtggccatcctcgacgccgacaaggagggctttctgcgctcggagacctcgctgatccag
accatcggccgcgccgcccgcaatgcggacgcccgctgcatcctctacgccgacaccatc
accggctcgatggagcgggcgatggccgagaccgagcgccgccgccagaagcagctcgcc
tacaacgcagagcacggcatcacgccgcaatcggtcaagcgcggcatcgccgatatcctc
gagagcgtgtacgagcgcgaccatgtccgcgtcgatacggggctggccaaggacgcgatc
accgtcggccacaacctcaaggcggtcatggccgacctggagaagcggatgcgcgcggcg
gccgccgatctcgacttcgaggaggcggcacggctgcgcgacgagctgaagcggctccag
gcgaccgaactcatggtctccgacgatcccatggcccgccagggcgatgtcgagcgcgag
gccgggcgctacggccagaagggcagccgcatcgccaagcccaccctcgacaatatgggc
cccggcaccgaccgcgaattgcccgccggggccgtgccctggcaggagcggccgaaggcg
cgctcgacgcaagggctcggcggccagaagccccgctacaagggcggcggcgggcgcaag
cgcggctga
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