Methylorubrum populi: Mpop_4954
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Entry
Mpop_4954 CDS
T00760
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
mpo
Methylorubrum populi
Brite
KEGG Orthology (KO) [BR:
mpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpo03400
]
Mpop_4954
Enzymes [BR:
mpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mpop_4954
DNA repair and recombination proteins [BR:
mpo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Mpop_4954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACB83050
UniProt:
B1ZLY1
LinkDB
All DBs
Position
5294072..5297515
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AA seq
1147 aa
AA seq
DB search
MNAPLTGFTVDDLTKAAQRRAADPRLSAWVSANAGAGKTKVLTDRVLRLLLDGAPPGRIL
CLTFTKAAAANMSIRVFQRLGRWVTLDDAALTAELIELTGERPARDTLRLARRLFARAVE
TPGGLKIETLHALCERLLHMFPFEANVPARFVVLDDNQSREAFEIETDNVLADAFLGNDQ
TLSDAFAVVGAEASGDTLREAIRAAMRTRALFSDHRALEPALARLPRALALADGASVATI
ERAILEGSTLGDWRAVAGRLRTGKATDERLADGLVEADAALEAGKALAPYRSVFFTDKDE
PRAAKSFGTKAVPEEVKQALLDEQARLIPLFDSLRAARALARTQGLFRLAAEIHRRVEAQ
KTRLGALDFDDLIHKTLDLLSRVGASWVLYKLDRGVDHVLVDEAQDTNPQQWEILRTLTA
EFAAGEGARGLTRTRFAVGDPKQSIYSFQGADPREFELTRRAWERAAKGAELDFADVSLR
LSFRTASHVLAAVDAVFRVPEHFAGLSFEAGTPGTVHASARAGVPGAVELWGIEEPAEAE
EPDAWAAPVDAPEPNAPAIVTARRIARAVKAWTTRGDACGRVWRPGDVLILVRKRSAAFE
EVIRALKGLGVPVAGQDRLEVAGHIAVLDLVAVGRAGLLPADDLTLATALKTPLVGLTDD
DLTRICARRPFSETLEDALTRHAEAGDAAAIRGLAALRLWIRLAAENGPFGFYAALLGPH
GGRSRLVARLGGEAGDAIDVFLAQAAEAETGGDAPCLEAFLADYVVRPGRGRSGLSVKRD
LEAGRDEVRVMTVHGAKGLEAPVVVVIDGCEPLGRNDPPLLGLDPAADGPLPPVWTGGRT
QDCAATLAARSALQARAREEHNRLLYVAMTRAADHLVIAPYRGATRETPASWCEMVRIGL
ERGLGPGEAIETEHGPITIWRDGSAASLAAAAEATALPEPEAVPDWLFSNAAPEAEAAPP
LSPSGALGAADGQRQPQRRLGDAEARRRGALVHALLEHLPRIEPARRAEAAERFTRARAP
ALDEGKRTDLVRSVLRLIETPDLAPLFSAQARAEVALSGRIVVDGVERDVTGRIDRLVVE
DGRVILCDFKTGRPPADDAPLPEREAAQVALYARLAAAIWPDHAITALLVWTSGPVVRRV
EGSRLGL
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccccgctgaccggcttcaccgtcgatgacctgaccaaggcggcccagcgccgg
gcggcggacccgcgcctctcggcctgggtctcggccaatgcgggagcgggcaagaccaag
gtgctcaccgaccgggtgctgcgcctgctcctcgacggggccccgcccggccgcatcctc
tgcctcaccttcaccaaggcggcggccgccaacatgtcgatccgcgtgttccagcgcctc
ggccgctgggtgacgctggacgacgcggcgctgaccgccgagctcatcgaactcaccggc
gagcggccggcccgcgacaccctgcggctcgcccgccgcctgttcgcccgcgccgtcgag
acgccggggggcctcaagatcgagaccctgcacgcgctctgcgagcggctgctgcacatg
ttcccgttcgaggccaacgtgccggcccgcttcgtcgtgctcgacgacaaccagtcgcgc
gaggcgttcgagatcgagaccgacaacgtgctcgccgacgcgttcctcggcaacgatcag
acgctctccgacgcattcgccgtcgtgggcgcggaagcctccggcgataccctgcgcgag
gcgatccgcgccgccatgcggacccgcgccctgttctccgaccatcgcgccctggagccg
gcgctcgcccgcctgccgcgcgcgctggcgctcgcggacggcgccagcgtcgcgaccatc
gagagggcgatcctggagggcagcacgctgggcgactggcgcgcggtcgcaggccggctg
cgcaccggcaaggccacggacgagcggctcgccgacgggcttgtggaggcggacgccgcc
ctcgaagcgggcaaggccctggcgccctaccgctcggtcttcttcaccgacaaggacgag
ccgcgggcggcgaagtcgttcggcaccaaggcggtgccggaggaggtgaagcaggcgctc
ctcgacgagcaggcccggctgatcccgctcttcgacagcttgcgcgccgcccgcgcgctc
gcccggacgcaggggctgttccggctggccgccgagatccaccgccgggtcgaggcgcag
aagacccggctcggcgccctcgatttcgacgacctgatccacaagaccctcgacctgctc
tcgcgggtcggcgcctcctgggtcctgtacaagctcgaccgcggcgtcgatcacgtcctc
gtcgatgaggcgcaggacaccaacccgcagcaatgggagatcctgcgcaccctcaccgcc
gagttcgcggcgggcgaaggggcacggggcctgacccgcacccgcttcgccgtgggcgat
cccaagcagtcgatctacagcttccagggtgccgacccgcgggagttcgagctgacccgc
cgcgcctgggagcgggcggcgaaaggcgcggaactcgacttcgccgatgtcagcctgcgg
ctgtccttccgcaccgcgagccacgtgctcgccgcggtcgatgcggtgttccgcgtgccg
gagcacttcgccggcctctccttcgaggccggcacgccgggcaccgtgcacgcctctgcc
cgggccggggtgcccggcgcggtcgaattgtggggtatcgaggagccggcggaggccgag
gagcccgatgcctgggccgcgcccgtcgatgcgcccgagcccaacgctccggccatcgtc
acggcgcgccgcatcgcccgtgcggtcaaggcctggacgacccggggcgatgcctgcggc
cgggtctggcggcccggcgacgtgctgatcctcgtgcgcaagcgctcggccgccttcgag
gaggtgatccgcgcgctcaaggggctcggcgtgccggtggcgggtcaggatcggctggag
gtcgccgggcacatcgccgtgctcgacctcgtcgcggtcggccgcgccgggctcctgccc
gccgacgacctgacgctcgccaccgccctcaagacgccgctggtcgggctcaccgacgac
gacctcacccggatctgtgcccgccggccgttctccgagacgctggaggatgcgctgacc
cgccacgcggaggccggcgatgcggctgcgatccgcggcctggcggcgctgcggctgtgg
atccgcctcgcggcggagaacggccccttcggcttctacgccgccctgctcggcccgcat
ggcgggcgcagccggctggtggcgcggctcggcggcgaggcgggcgacgccatcgacgtg
ttcctcgcccaggcggccgaggccgagaccgggggcgacgccccctgcctcgaagcgttc
ctggccgattacgtggtgcggcccggccgcggcaggagcggcctctcggtcaagcgcgac
ctggaggccggccgcgacgaggtgcgggtgatgacggtgcacggcgccaagggcctggag
gccccggtcgtcgtcgtcatcgacggctgcgagccgctcggccgcaatgatccgccgctg
ctcggcctcgaccccgccgccgacggcccgctgccgccggtctggaccgggggacgcacc
caggattgcgcggcgacgctggccgcccgctccgcgctccaggcgcgggcgcgcgaggag
cataaccgcctgctctacgtcgccatgacccgggccgccgaccacctcgtcatcgccccc
tatcgcggggcgacgcgggagacgccggcctcatggtgcgagatggtccgcatcggcctg
gagcgggggttggggcccggcgaggcgatcgagaccgagcacgggccgatcacgatctgg
cgcgacggctcggccgcgtcgctggccgcggcggcggaggccacggccctgccggagccc
gaggcggtgccggactggctgttctcgaacgccgcgccggaggccgaggcggcgcccccg
ctgagtccctcgggcgccctcggtgccgcggacgggcagcgccagccgcagcgccgcctg
ggggatgccgaggcgcgccgccgcggtgccctggtccacgcgctcctcgaacacctgccg
cggatcgagccggcccgccgcgccgaggctgccgagcgcttcacccgcgcccgggcgccg
gccctggacgagggcaagcgcacggatctcgtgcgctccgtgctgcggctgatcgagacg
cccgacctcgctccgctcttctcggcgcaggcacgggccgaggtggcgctctcgggtcgg
atcgtggtggacggcgtggaacgcgatgtcaccggccggatcgaccggctcgtcgtcgag
gacggccgggtgatcctgtgcgacttcaagaccggccgcccgcccgcggacgacgcgccg
cttcccgagcgcgaggcggcgcaggtcgccctctacgcccggctcgccgcagcgatctgg
ccggatcacgcgatcaccgccctgctcgtctggacctcggggccggtggtgcggcgggtg
gagggatcgcggctcgggctctga
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