Methylorubrum populi: Mpop_4964
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Entry
Mpop_4964 CDS
T00760
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mpo
Methylorubrum populi
Pathway
mpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mpop_4964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpo03019
]
Mpop_4964
03009 Ribosome biogenesis [BR:
mpo03009
]
Mpop_4964
Enzymes [BR:
mpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mpop_4964
Messenger RNA biogenesis [BR:
mpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mpop_4964
Ribosome biogenesis [BR:
mpo03009
]
Prokaryotic type
rRNA helicases
Mpop_4964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACB83060
UniProt:
B1ZLZ1
LinkDB
All DBs
Position
5307371..5309074
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AA seq
567 aa
AA seq
DB search
MPFPSLPSPLARALTERNYAEPTPVQQAVLDAAPDRDLLVSAQTGSGKTVAFGLAIAGTL
LGPEEALPPPAAPLALVIAPTRELALQVQRELTWLYAQTGARVVPCVGGMDPRREARALE
AGVHIVVGTPGRLRDHMERGRLVTEGLRAVVLDEADEMLDMGFREDLEFILAATPEDRRT
LLFSATLPKAIVALAESYQRDALRLAVAGETRGHADIVYRAVRVMPREIEHAVVNVLRYV
DAPVAIVFCNTRDGVRHLQASLTERGFSAVALSGELGQGERNAALQALRDGRARVCVATD
VAARGIDLPGLDLVIHADLPHDAEVMQHRSGRTGRAGRKGTSVVLVPPARRRRAEQMFAI
AKVSPDWSGPPNADEIRTLDRERMMSDPLLAEPETEEEREWERDWAEALMERFPPERLAA
AFARLYRSRIPVPEEVSDPAYETSRRPDSRSGVPVGAPRVGEDEPAAWFRLNLGRRDRAE
PRRLLPMLTRRGQIGRGDIGAIRIFDNETTFEVRASAAEDFAAAFARRGSADVRVERMQG
DGPAPAKAKSPRAQRHRREASKSSRGG
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
ttgccatttccgtctctgccctcccccctcgcccgggcgctcaccgagcgcaactatgcc
gagccgacccctgtccagcaggcggtgctcgatgccgcaccggaccgcgacctgctcgtc
tcggcccagaccggttcgggcaagaccgtcgccttcggcctcgccatcgccggcacgctg
ctcggacccgaggaggctctgccgccgccggccgcgccgctcgccctcgtgatcgccccg
acccgcgaactggcgctccaggtgcagcgggagctgacctggctctacgcgcagaccggt
gcgcgcgtcgtcccctgcgtcggcggcatggatccgcgccgcgaagcccgcgcgctggag
gccggcgtccacatcgtcgtcggcaccccggggcgcctgcgcgaccacatggagcgcggc
cggctcgtcaccgaggggctgcgcgccgtcgtcctcgacgaggccgacgagatgctcgac
atgggctttcgcgaggatctcgaattcatcctggcggccacccctgaggaccgccgcacc
ctcctgttctcggcgaccctgccgaaggccatcgtcgcgttggccgagagctaccagcgc
gacgccctgcgcctcgcggtcgccggcgagacgcgggggcacgccgacatcgtctaccgc
gccgtgcgggtgatgccccgcgagatcgagcacgccgtcgtcaacgtgctgcgctacgtc
gatgcgccggtggcgatcgtgttctgcaacacgcgcgacggggtgcgccatctccaggcc
tcgctgaccgagcgcggcttctcggccgtggcgctctcgggcgaactcggccagggcgag
cgcaacgccgcgctccaggccctgcgcgacggccgtgcccgggtctgcgtcgccaccgat
gtcgccgcccgcggcatcgacctgccgggcctcgacctcgtcatccacgccgacctgccg
cacgatgccgaggtgatgcagcaccgctccggccgcaccggccgcgccggccgcaagggc
acgagcgtcgtgctggtgccgcccgcccggcggcggcgggccgagcagatgttcgccatc
gccaaggtcagccccgattggagcggcccgccgaacgcggacgagatccgcaccctcgac
cgcgagcggatgatgtccgacccgctgctcgccgagcccgagacggaggaggagcgcgag
tgggagcgggactgggccgaggcgctgatggagcgcttccccccggagcgcctcgccgcc
gccttcgcccggctctaccgttcgcgcatccccgtgccggaggaggtcagcgatcccgcc
tacgagaccagccgccgcccggattcgcgcagcggcgtcccggtcggcgctccgcgggtc
ggcgaggacgagccggcggcgtggttccggctcaatctcggccgccgcgaccgggccgag
ccgcgccgcctgctgccgatgctgacccgtcgcgggcagatcggccgcggcgacatcggc
gcgatccggatcttcgacaacgaaacgaccttcgaggtgcgcgccagcgccgcggaggat
ttcgcggccgccttcgcccggcgcgggtcggcggatgtccgcgtcgagcggatgcaggga
gacggaccggcgccggccaaggcgaagagcccgcgcgcccagcgtcaccgccgcgaggcc
tccaagtcgagccgcggcggctga
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