Mycolicibacterium poriferae: MPOR_03640
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Entry
MPOR_03640 CDS
T07158
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mpof
Mycolicibacterium poriferae
Brite
KEGG Orthology (KO) [BR:
mpof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpof03019
]
MPOR_03640 (hrpA)
Enzymes [BR:
mpof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MPOR_03640 (hrpA)
Messenger RNA biogenesis [BR:
mpof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MPOR_03640 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
HA2_N
T2SSE
NACHT
nSTAND3
AAA_30
ABC_tran
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
BBX49338
UniProt:
A0A6N4V5P7
LinkDB
All DBs
Position
complement(368763..372683)
Genome browser
AA seq
1306 aa
AA seq
DB search
MSDPSPATIRELRARLDGVTLRDAARLGRRLKKLGGDPGKLDQFTAALAAAEGLVASRRA
AVPQISYPDLPVSAKREDIAAAIAANQVVIVAGETGSGKTTQLPKICLELGRGIRGTIGH
TQPRRLAARTVAARIADELGTPLGETVGYTVRFTDQASDRTLVRLMTDGILLADIQRDRR
LLRYDTLIIDEAHERSLNIDFLLGYLRELLPRRPDLKVIVTSATIEPERFAAHFGTAAGP
APIVEVSGRTYPVEIRYRPLEVVVPVEGAGDSDDPDDPDHEVVRTELRDQTEAIVDAVAE
LEAEPAGDVLVFLSGEREIRDTAEALRGAVGPDVEVLPLYARLPTAEQQKVFAAHQGRRI
VLATNVAETSLTVPGIRYVVDPGTARISRYSRRTKVQRLPIEPISQASAAQRAGRSGRTA
PGVCIRLYSEDDFAARPRYTEPEILRTNLAAVILQMAALGFGDIEGFGFLDPPDARSIRD
GVALLQELGAFEGAELTAVGRRLAQIPVDPRLGRMILAADAENCVREMLILAAALSIPDP
RERPTDREDAARQKHARFADEHSDFVSFLNLWNYLGEQRKERSGSSFRRMCRDEFLHYLR
IREWQDLVGQLRGICRDLGITEQDEPADPGQIHQALTAGLLSHIGFREGDGRDYTGARNA
RFVLAPGSVLTRRPPRWVVVADLVETSRLYGRTAARIDPEAVERVAGHLVQRTYSEPHWD
AKRGAVMAFERVTLYGLPLVARRRVGYAQVDPEVSRGLFIRHALVDGEWQTKHHFFRDNA
RLRTELAELEDRARRRDLLVGDDEIFAFYDARIPAEVVSARHFDGWWRTARHRTPDLLTM
TRADLLRSDTDDEQPDVWTSGDVALPLSYRFDPSAADDGVTVHVPVEVLARLGGDDFAWQ
VPALREELLTALIKSLPKDLRRNFVPAPDTARALLASISPDSGPLLDAVQRELRRRTGIL
VPIDAFDLDKLPPHLRVTFAVEGPDGTVVSRGKNLDELQQRLAAPARQAVADTVGAAVER
KGLRNWPADLDELPRVVEQRGAAGNPVRGYPALVDSVAAVDIRVFATEAEQAAAMPAGSA
RLLRLAGPSTTKTLEKSLDPRTRLVLANNPDGSLPALLDDCTDAAVQALVTAPVWTRTDF
TAAQQRLAARLAPTVTEVVRRTEKVLTAWHDVQLALPEVPSAAQADAVADIRSQLARLLP
VGFVSAAGPNRLTDLTRYLLAIGRRLERLPQAPAADRERMARVAAVQRSYDELRSALSPA
RAAASDVRDIAWMIEELRVSLWAQQLGTRGSVSEQRILRAIDAVAT
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacccgtcccccgccacgatccgcgagctgcgcgcccgcctcgacggcgtcacc
ctccgtgacgccgcccggctcgggcggcgcctgaagaagctcggcggggacccgggaaag
ctagaccagttcaccgccgcgctggcggcggccgaggggttggtggcgtcccgacgggcc
gcggtaccgcagatcagctaccccgatctgccggtcagcgcgaagcgggaggacatcgcg
gccgcgatcgcggccaaccaggtggtgatcgtggccggcgagaccggctcgggcaagacc
acccagctgcccaagatctgtctggaactcggccgcggtatccgcggcaccatcggacac
acgcagccgcgccggctggctgcacgcaccgtcgccgcccgcatcgccgacgaactcggc
accccgctgggggagacggtcggctacaccgtgcgattcaccgaccaggccagcgaccgc
accctggtccggttgatgaccgacggcattctgctggccgacatccagcgggatcgccgt
ctgctgcgctacgacacgctgatcatcgacgaagcgcacgagcgcagcctcaacatcgac
ttcctgctcggctatctgcgcgagctgctgccgcggcgcccggatctgaaggtgatcgtc
acctcggcgaccatcgagccggagcgattcgccgcgcacttcggcaccgcagccggcccc
gccccgatcgtcgaggtgtccgggcgcacctacccggtcgaaatccgctatcggccactg
gaagtggtggtgcccgtcgagggggcgggagattccgacgatcctgacgaccccgaccac
gaggtcgtgcgcaccgagttgcgcgaccagaccgaggccatcgtcgacgcggtcgccgag
ttggaagccgaacccgcaggcgatgtgttggtgttcctgtccggggaacgcgagatccgc
gacaccgccgaggcgttgcggggtgcggtgggaccggatgtggaggtgttgccgctgtac
gcccggctgccgaccgccgagcagcagaaggtgttcgccgctcaccaggggcggcggatc
gtgttggccaccaacgtcgccgaaacctcgctgaccgtgccgggtatccgctacgtggtc
gatccgggcaccgcgcgcatctcccgctacagccgccggaccaaggtgcagcggctgccg
atcgagccgatctcgcaggcgtcggcggcgcaacgggccggccgatccggacgcaccgca
cccggggtctgtatccggttgtactccgaagacgacttcgcggcacgcccgcgctacacc
gagccggagatcctgcgcaccaacctcgccgccgtcatcctgcagatggccgccctcgga
ttcggtgacatcgagggcttcggtttcctcgacccgcccgacgcccgcagtatccgcgac
ggagtggcgttgttgcaggagctcggcgccttcgagggcgctgagctcaccgccgtcggg
cggcgcctggcgcagattccggtcgatccgcggctgggccggatgatcctggccgccgac
gccgagaactgtgtccgcgagatgctgatcctggctgcggcactgtcgattccggatccg
cgggagcggcccaccgaccgcgaggacgccgcccggcagaagcatgcccgcttcgccgac
gagcactccgacttcgtgtcgttcctgaacctgtggaactacctcggtgagcaacggaaa
gaacgatcgggcagctcatttcggcggatgtgccgcgacgagttcctgcactacctgcgt
atccgggaatggcaggacctggtcggccagctgcggggcatctgtcgcgacctcggcatc
accgaacaggacgagccggccgatccggggcagatacaccaggcgctgaccgcggggctg
ttgtcgcacatcgggttccgggagggcgacggacgggactataccggtgcccgcaacgcg
cggttcgtcctggcgcccgggtcggtactgacccggcgcccgccccggtgggtcgtcgtc
gccgatctcgtcgagaccagccggctctacggcagaaccgcggcgcgcatcgaccccgag
gccgtggaacgggtggccgggcacctggtgcagcgcacgtacagcgaaccacactgggat
gccaagcgcggcgcggtgatggcgttcgagcgggtcacgctctacgggctgccgctggtg
gcgcgccgccgcgtcggctacgcacaggtcgatccagaggtgtcccgcggcctgttcatc
cggcatgcgctcgtcgacggcgagtggcagacaaagcaccacttcttccgcgacaacgcc
cgcctgcgaaccgaactcgccgagttggaggaccgcgcccggcgccgtgatctgctcgtc
ggcgacgacgagatcttcgcgttctacgatgcgcggatcccggccgaggtggtctcggcg
cggcacttcgacgggtggtggcgcacggcgcggcaccgcacaccggatctgctcacgatg
acgcgcgcggatctgctgcgctcggacaccgacgacgagcagcccgacgtgtggacgtcc
ggggacgtggcgctgccgctgtcctaccggttcgaccccagcgccgccgacgacggggtg
acggtgcacgttccggtcgaggtgctcgcccgcctcggcggcgacgacttcgcctggcag
gtgccggcgctgcgcgaggagctgctcacggcgctgatcaagtcactgccgaaagacctg
aggcgcaacttcgttcccgcccccgacaccgcgcgcgccctgctggcgtcgatctcgccc
gacagcggaccgctcctcgacgcggtacagcgcgaactgcggcggcgcaccgggatcctg
gtacccatcgacgccttcgacctggacaagctgccaccgcacctgcgggtcaccttcgcg
gtcgaaggcccggacggcacggtcgtctcgcgcggcaagaacctcgacgaactgcagcag
aggctggccgcacccgcaaggcaggccgtcgcggacaccgtcggcgcggcggtcgaacgc
aaggggctgcgcaactggccggccgacctcgacgaactgccgcgcgtcgtcgaacagcgc
ggtgcggccggtaacccggtgcggggatatccggcgctggtggacagcgttgccgcggtg
gacatccgggtgttcgcgaccgaggcggagcaggccgcggccatgccggcgggaagcgcg
cggctgctgcggctggccggcccgtcgacgacgaagacgctggagaagagcctggacccg
cgcaccaggctggtgctggccaacaatccggacgggtcgctgcccgcgctgctcgacgac
tgcaccgacgccgccgtgcaggcgctggtcaccgcgccggtgtggacccgcaccgacttc
accgccgcccagcagcggctcgcggcgcgcctggcgccgacggtcaccgaggtggtgcgg
cgcaccgagaaggtgctcaccgcctggcatgacgtgcaattggcgcttccggaagtcccc
agcgccgcccaggccgacgcggtcgccgacatccgcagccagctcgcccggttgctgccg
gtcggattcgtctccgcggcaggtccgaacaggttgaccgacctgacccgctacctgctg
gcgatcggccgccgtctcgagcggctgccgcaggcgcccgccgccgaccgtgaacgcatg
gcacgtgttgctgccgtgcagcgttcctatgacgagctgcgttcggcgttgtcgccggcg
cgggccgcggcttccgacgtccgcgacatcgcgtggatgatcgaagaactgcgcgtctcg
ttgtgggcccagcaactcggcacccgcggctcggtcagtgagcaacgcatcctgcgcgcg
atcgacgcggtcgccacctga
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