Mycolicibacterium poriferae: MPOR_15340
Help
Entry
MPOR_15340 CDS
T07158
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mpof
Mycolicibacterium poriferae
Pathway
mpof03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpof00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MPOR_15340 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpof03021
]
MPOR_15340 (rpoC)
03400 DNA repair and recombination proteins [BR:
mpof03400
]
MPOR_15340 (rpoC)
Enzymes [BR:
mpof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MPOR_15340 (rpoC)
Transcription machinery [BR:
mpof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MPOR_15340 (rpoC)
DNA repair and recombination proteins [BR:
mpof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MPOR_15340 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BBX50508
UniProt:
A0A6N4V8Z9
LinkDB
All DBs
Position
1605360..1609337
Genome browser
AA seq
1325 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRNWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDDEMRHNELSTLEAEMAVERKAVEDQRDADLEARAQKLEAD
MKELEDEGAKSDVKRKVRDGGEREMRQLRDRAQRELDRLEEIWTTFTKLAPKQLIVDELL
YRELQDRYGEYFEGAMGAESIKKLIENFDIEAEAENLREVIRSGKGQKKLRALKRLKVVA
AFQTNSNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTTEIDGDLGEYT
AAAKAGDKGVSHAVPETGVFSSPAEAIMAMDRGALSVRAKIRVRLTQLRPPAEVEAELFP
DGWKQGDAWTADTTLGRVLFNELLPPTYAFVNEQMHKKVQARIINDLAERFPMIVVAQTV
DKLKDAGFFWATRSGVTVSMADVLVPPQKQEILDRYEAEADGIEKKYQRGALNHDERNEA
LVKIWQDATEEVGEALRAHYPKDNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIP
RPIKSSFREGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCET
ERGINVTLAERADDGTLVRDQHIETSAYARTLATDAVDTDGNVVVERGHDLGDPAIEALL
AAGITEVKVRSVLTCATGTGVCAMCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMR
TFHQGGVTGGADIVGGLPRVQELFEARVPRNRAPIADVSGRVQLEESEKFYKITIVPDDG
GEEVVYDKLSRRQRLKVFKHEDGSERLLTDGDHVEVGQQLLEGSADPHEVLRVQGPREVQ
IHLVKEVQEVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERAEFESENR
RVVAEGGEPAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKEN
VIIGKLIPAGTGINRYRNIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYG
YSDYR
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
gtgttagacgtcaacttcttcgatgaactccgcatcggtctggccaccgcggacgacatc
cgtaactggtcctacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
ccggagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtccggttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgcgccg
gtcacccacatctggtacttcaagggtgtcccgtcgcggctcgggtatctgctcgacctc
gcgcccaaggatctcgagaagatcatctacttcgcggcctacgtgattacggcggtcgac
gatgagatgcggcacaacgagctgtccaccctcgaggccgagatggccgtcgagcgcaag
gccgtcgaggaccagcgtgacgcggacctcgaggcccgggcgcagaagctcgaggccgac
atgaaggagctcgaggacgagggcgccaagtccgacgtcaagcgcaaggtgcgtgacggc
ggcgagcgcgagatgcgtcagttgcgtgaccgggcccagcgcgagctggaccggctcgag
gagatctggacgacgttcaccaagctggctcccaagcagctgatcgtcgacgagttgctc
taccgcgagctgcaggaccgctacggcgagtacttcgagggcgccatgggtgccgagtcg
atcaagaagctcatcgagaacttcgacatcgaggccgaggccgagaacctgcgcgaggtc
atccgcagcggcaaggggcagaagaagctgcgcgcgctcaagcgcctcaaggtcgtcgcg
gccttccagaccaacagcaactcgccgatgggcatggtgctcgacgccgttccggtgatc
ccgccggagctgcgaccgatggttcagctcgacggtggccgcttcgccacctccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccggctcaagcgtctgatcgacctc
ggtgcacccgagatcatcgtcaacaacgagaagcgcatgctccaggagtcggtggacgcg
ctgttcgacaacggccgccgcggccgcccggtcaccggaccgggcaaccgtccgctgaag
tcgctttcggatctgctcaagggcaagcagggccggttccggcagaacctgctcggtaag
cgtgtcgactactcgggccgttcggtcatcgtggtcggtccgcagctcaagctgcaccag
tgcggtctgcccaagctgatggcgctcgagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggagcgtcagcgg
ccccaggtgtgggacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgc
gcgcccacgctgcaccgcctcggtatccaggctttcgagccgcagctggtcgagggcaag
gccatccagttgcacccgctggtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgagcgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgtcgccggcgtcgggtcgtccgctggccatgccccgtctggac
atggtgaccggtctgtactacctgaccaccgagatcgacggtgacctcggcgagtacacc
gctgccgccaaggctggagacaagggcgtgtcccacgccgtgccggagaccggtgtgttc
agctcgccggccgaggccatcatggcgatggaccgcggtgcgctgagcgtgcgcgccaag
atccgggtgcggctgacgcagctgcgtccgcccgcagaggtcgaggccgagctgttcccc
gacggctggaagcagggcgatgcctggaccgcggacaccacgctgggccgggtgctgttc
aacgagctgctgccgccgacgtacgcgttcgtcaacgagcagatgcacaagaaggtgcag
gcccggatcatcaacgatctggccgagcggttcccgatgatcgtcgtcgcgcagaccgtc
gacaagctcaaggacgccggcttcttctgggcgactcgctccggtgtgacggtctcgatg
gccgacgtgctggtgccgccgcagaagcaggagatcctggaccggtacgaggccgaggcc
gacggcatcgagaagaagtaccagcgcggcgcgctcaaccacgacgagcgcaacgaggcc
ctggtcaagatctggcaggacgccaccgaagaggtcggtgaggcgctgcgcgcccactac
ccgaaggacaacccgatcatcacgatcgtggattcgggcgctacgggtaacttcacccag
acgcggaccctggccggcatgaagggtctggtgaccaacccgaagggtgagttcatcccg
cgtccgatcaagtcctcgttccgtgagggcctgacggtgctggagtacttcatcaacacc
cacggcgcccgtaagggtctggcggacaccgcgctgcgtacggccgactcgggttacctg
acccgtcgtctggtggacgtgtcgcaggacgtcatcgtccgcgagaccgactgcgagacc
gagcgcggcatcaacgtcacgctggccgagcgggccgacgacggcactctggtgcgcgat
cagcacatcgagacgtcggcgtacgcccgcacgctggccaccgacgccgtcgacaccgac
ggcaacgtggtcgtcgagcgtggccacgacctgggcgatccggccatcgaggcgttgctg
gcggccggtatcaccgaggtcaaggtccggtccgtgctgacctgtgccaccggcaccggc
gtgtgcgcgatgtgctacggccgttcgatggcgaccggcaagctggtcgacatcggcgag
gccgtcggcatcgtggccgcgcagtccatcggtgagcccggcacgcagctgacgatgcgt
accttccaccagggcggtgtgaccggtggcgccgacatcgtcggtggtctgccgcgtgtg
caggagctgttcgaggctcgcgttccgcgcaaccgggccccgatcgccgacgtctccggg
cgggtgcagctggaggagagcgagaagttctacaagatcaccatcgttcccgatgacggg
ggcgaggaggtcgtgtacgacaagctctcccgtcgtcagcgcctgaaggtgttcaagcat
gaggacggttccgagcgtctgctgaccgacggcgatcacgtcgaggtgggccagcagctg
ctggagggttcggccgatccgcacgaggtgctgcgcgtccagggtccccgcgaggtgcag
atccacctcgtcaaggaggtccaggaggtctaccgggcccagggtgtgtcgatccacgac
aagcacatcgaggtcatcgtccggcagatgctgcgtcgcgtcacgatcatcgattcgggt
gcgacggagttcctgcccggttcgctgaccgagcgcgccgagttcgagtcggagaaccgc
cgggtcgtcgccgagggtggcgagcccgcggccggccgtccggtgctgatgggtatcacg
aaggcgtcgctggccaccgattcgtggctgtcggcggcgtcgttccaggagaccacgcgc
gtgctgaccgatgcggcgatcaactgccgcagcgacaagctgcagggtctgaaggagaac
gtgatcatcggcaagctgatcccggcgggcaccggcatcaaccggtaccgcaacatccag
gtgcagccgaccgaagaggcccgtgccgcggcgtacacgatcccgtcctacgaggatcag
tactacagcccggacttcggccaggccaccggcgctgcggtgccgctggacgactacggc
tactcggactaccggtag
DBGET
integrated database retrieval system
