Mycolicibacterium poriferae: MPOR_19000
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Entry
MPOR_19000 CDS
T07158
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mpof
Mycolicibacterium poriferae
Brite
KEGG Orthology (KO) [BR:
mpof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpof03021
]
MPOR_19000
Transcription machinery [BR:
mpof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MPOR_19000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_Crp_2
HTH_24
MarR
HTH_3
MarR_2
DUF7343
HTH_IclR
KORA
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BBX50874
UniProt:
A0A6N4V8C0
LinkDB
All DBs
Position
1973421..1974143
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AA seq
240 aa
AA seq
DB search
MFRELAELDADSAKFQRQRDRIVERCLPLADHIARRFDGRGEPRDDLVQVARVGLVNAVI
RFDVTAGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRLKELHLRLGSATADLSQRLGRA
PTASELAAELEMDRDEVIEGLVAGSSYNTLSIDSGGSGNEDAPAIADTLGDVDNSLDQIE
NREALRPLLESLPERERTVLVLRFFESMTQTQIAERVGISQMHVSRLLAKSLARLRDQME
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcgagttggctgagctcgatgcggactcggcaaagttccaacgccagcgtgat
cggattgtcgagcggtgcctgcctctggccgatcacatcgcccggcggttcgacggccgg
ggtgaaccacgcgacgatcttgtccaggttgcgcgggtgggcctggtcaacgccgtcatc
cgcttcgacgtgacggccggctcggacttcgtgtcgttcgcggtgcccaccatcatgggc
gaggtccgccggcacttccgcgacaacagctggtcggtcaaggtgccgcgccgtctgaag
gaacttcacctgcggttgggttcggcgaccgccgatctgtcgcaacgcctgggccgcgcc
ccgacggcgtcggagttggcggccgagctcgagatggatcgcgacgaggtcatcgagggc
ctggtcgcgggcagctcgtacaacacgctgtcgatcgacagcggtggcagcggaaacgag
gacgctcccgcgatcgccgacacgctcggcgacgtcgacaacagcctggatcagatcgag
aaccgcgaggcgctacggccgctgctcgagagcttgcccgagcgggagcgcaccgtgctg
gtactgcggtttttcgagtcgatgacgcagacgcagatcgccgagcgggtcggcatctcg
cagatgcacgtttcccgcctgctcgcgaagtcgctagcgcgactccgtgaccagatggag
tag
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integrated database retrieval system
