Mycolicibacterium poriferae: MPOR_27050
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Entry
MPOR_27050 CDS
T07158
Symbol
rnj
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mpof
Mycolicibacterium poriferae
Pathway
mpof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPOR_27050 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpof03019
]
MPOR_27050 (rnj)
Messenger RNA biogenesis [BR:
mpof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MPOR_27050 (rnj)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BBX51679
UniProt:
A0A6N4VB79
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Position
2815794..2817473
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AA seq
559 aa
AA seq
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MDSALTPPEPLAPGGLRVTALGGINEIGRNMTVFEHLGRLLVVDCGVLFPTHDEPGVDLI
LPDLRHIEHRLDEIEAVVVTHAHEDHIGAIPFLLKLRADIPIVGSKFTLALVAAKCREHR
LKPVLVEVSEGQRSEHGVFECQYFAVNHSIPGCLAIAIHTGAGTVLHTGDIKLDQMPLDG
RPTDLPGMSRLGDAGVDLFLCDSTNADIPGVGPSESEIGPALHRLIRGAEGRVIVACFAS
NVYRVQQIIDAAVALGRRVSFVGRSMVRNMGIARELGYLDVADEDVLDIAAAEMMPADRV
VLITTGTQGEPMAALSRMSRGEHRSITLTDGDLIILSSSLIPGNEEAVYGVIDSLAKIGA
RVVTNQQARVHVSGHAYAGELAFLYNGVRPRNVMPVHGTWRMLRANAALAARTGVPDDNI
VVAENGVSVDLVAGRATIAGAVSVGKMFVDGLITGDVGDATLGERLILSSGFVAVTVVVR
RGTGKTAAPAHLHSRGFSEDPKALEAVARKVETELENLASQNITDPTRIAQAVRRTVGKW
VGETYRRQPMIVPTVIEIG
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtggattcagcgctcaccccaccggagcccctggccccaggcggccttcgcgtcaccgcg
ttgggcggtatcaacgaaatcggccgcaacatgaccgttttcgagcatctgggacggctg
ttggtcgtcgattgcggtgtgctgttcccgacacacgacgaacccggcgtcgacttgatc
ctgccggatctgcggcacatcgagcatcggctcgacgagatcgaggcggtcgtcgtcacc
cacgcacacgaagaccacatcggtgcgatcccgtttctgctcaagttgcgcgccgacatt
cccatcgtcgggtcgaagttcacgctcgcactggtggcggcgaagtgccgcgagcaccgg
ctcaagcctgtcctggtcgaagtctccgagggccagcgctccgagcacggcgtgttcgaa
tgccagtacttcgccgtcaaccactccatccccggctgccttgccatcgcgatccacacc
ggtgccggcacggtgctgcacaccggggacatcaagctcgaccagatgccgctggacggc
agacccaccgacctgcccgggatgtcgcggctcggtgatgccggagtggacctgttcctc
tgtgactccacgaacgccgacatccccggtgtcgggccctcggaaagcgagatcggcccg
gcgctgcaccggttgatccgcggcgccgagggccgcgtcatcgtcgcgtgcttcgcctcc
aacgtctaccgggtacaacagatcatcgatgcggccgtggcactcggacggcgcgtgtcg
ttcgtcggacgctcgatggtgcgcaacatgggcattgcccgggagttgggttatctcgac
gtcgccgacgaggacgtgctcgacatcgccgccgccgagatgatgccggccgaccgcgtc
gtgctgatcaccaccggcacccagggcgagccgatggcggccctgtcacggatgtcgcgc
ggtgagcaccgcagcatcacgctgacggacggcgacctgatcatcttgtcctcgtcgctg
ataccgggcaacgaggaagccgtgtacggcgtgatcgattcactggccaagatcggcgcc
cgtgtcgtcaccaaccagcaggcgcgcgtccacgtctccggtcacgcctacgccggcgag
ctggcattcctctacaacggcgtgcggccgcgcaacgtcatgcccgtgcacgggacctgg
cggatgctgcgggccaacgccgcgctggccgcgcgcaccggcgtgccggacgacaacatc
gtcgtcgccgagaacggtgtcagcgtggacctggtggccggacgcgcgaccatcgccggc
gcggtgtcggtgggcaagatgttcgtcgacggcttgatcaccggcgatgtcggggacgcc
acactgggggagcggctgatcctgtcctcgggtttcgtcgcggtaaccgtggtcgtccgg
cgcggcaccgggaaaaccgccgcgcctgcgcacctgcattctcgcggcttctccgaggat
cccaaggcgctcgaggcggtcgctcgcaaggtcgagaccgagctggagaaccttgcctcg
cagaacatcaccgaccccacccggatcgctcaagctgttcgccggacggtcggcaagtgg
gtgggggagacgtaccgccgacagccgatgatcgtgcctaccgtgatcgagatcggctga
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