Mycolicibacterium poriferae: MPOR_53390
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Entry
MPOR_53390 CDS
T07158
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mpof
Mycolicibacterium poriferae
Pathway
mpof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPOR_53390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpof03019
]
MPOR_53390
03400 DNA repair and recombination proteins [BR:
mpof03400
]
MPOR_53390
Enzymes [BR:
mpof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MPOR_53390
Messenger RNA biogenesis [BR:
mpof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MPOR_53390
DNA repair and recombination proteins [BR:
mpof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MPOR_53390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
BBX54313
UniProt:
A0A6N4VJA9
LinkDB
All DBs
Position
complement(5581026..5583101)
Genome browser
AA seq
691 aa
AA seq
DB search
MATRAEAQAILEQLAGPSAVLRYDQWAAIEALVVQRRRALVVQRTGWGKSAVYFIAAKLL
RAAGLGATVIVSPLLALMRNQVAAADRAGVHAATINSSNVADWSDIHARVRGGDLDVLLV
SPERLNNPDFRDEVLPALARDAGLVVVDEAHCVSDWGHDFRPDYRRIRTLVAELGADIPV
LATTATANDRVVADVAAQLGVGGRDTLVLRGGLDRESLRLSVVQAGNPAQRAAWLATHLD
ALPGSGIVYTLTVAQAHDVAALLREHGYQVAAYTGATEAAEREQLETDLLENRVKALIAT
SALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRSTSSAEVVLLPGREDQDVWRYFSS
VAFPSEAMVRSVIAALDPDRPTSTPALEPLVDLNRSRLEMVLKVLDVDGAVRRVKGGWVA
TGTPWNYDEQRYRTLEEARRREQQAMLDYQSTDGCRMAFLRRQLDDPELGAQERCGRCDN
CAGSRFDGAVDSTAADNARERLMRPGVEIAARRQWPTGLAKLGVELSGRISDGPAPGRAI
GRLTDLGWGARLRRLLAEEDAEVPDDVVAAAVKVLASWDWDTRPTAVMALDSDTHPTLIT
SLARRLAELGRLTDLGTLHYDPQRRPVTAVNSAYRVAALQGSWSAPDCPFDGPVLLVDDL
ADTGWTFTMAARAVRAAGAPAVLPFALASSS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacgagccgaagcgcaggcaatcctggaacaactcgctggtccatcggctgtc
ctgcggtacgaccagtgggcggccatcgaagcgctggtggtgcagcgccgtcgcgcgctg
gtggtgcaacgcaccggctggggcaagtccgcggtgtacttcatcgccgcgaagctgctc
cgcgcggcagggctcggcgcaaccgtcatcgtgtcgcctctgctggcgctgatgcgtaac
caggtcgctgccgccgaccgggccggcgtgcatgccgcgaccatcaactccagcaacgtg
gcggactggtcggacatccacgcccgggtgcgcggcggtgacctggatgtacttctggtc
agcccggaacggctgaacaaccccgatttccgcgacgaggtgcttccggcgctggcccgc
gatgccgggctggtcgtcgtcgacgaggcccactgcgtctcggactggggacacgacttt
cggcccgattaccggcgcatccgcactctggtcgccgaactgggcgccgacatcccggtg
ttggccaccactgccaccgccaacgaccgggtcgtggccgatgtcgccgcgcagctcgga
gtggggggacgcgacacgttggtgttgcgcggcggcctggaccgtgagtctctgcggttg
tcggtggtgcaggcgggcaatcccgcccagcgcgcagcgtggctggccacccacctcgac
gcgctgccggggtcagggatcgtctacaccctgaccgtcgctcaggcgcacgatgtcgcg
gcgctgctgcgtgagcacggttaccaggtcgcggcctacaccggcgccaccgaggcggcc
gagcgggaacagctcgagaccgacctgctcgagaaccgggtgaaggcgctgatcgcgacg
tcggcgctggggatgggtttcgacaagccggatctcgggttcgtcgtccacctcggtgcg
ccgtcctcaccgatcgcgtactaccagcaggtgggacgagcgggcaggtcgacgtcgagc
gccgaggtggtgctgctgcccgggcgggaagaccaggacgtgtggcggtacttctcctcg
gtcgcgttcccgtcggaagccatggtgcgctcggtgatcgccgcgctcgacccggatcgt
ccgacatcgacacccgcgctggagccactggtcgacctgaaccgttcccggctggagatg
gtgctcaaggtgctcgacgtcgacggtgccgtgcgccgggtgaagggtggctgggtggcc
accgggacgccgtggaattacgacgaacagcggtatcggactctggaggaggcccgccgg
cgcgagcagcaggcgatgctcgactaccagtccaccgacggctgccggatggccttcctg
cggcgtcagctcgatgatccggagctcggggcgcaggagcggtgtggccgttgcgacaac
tgcgccgggtcgcgattcgacggtgccgtcgacagcactgccgccgacaatgcgcgcgag
cggctgatgcgtcccggcgtagagatcgccgctcgccgccagtggcccaccgggctggcc
aagctgggcgtcgagctgtccggccggatctccgacggtcccgccccgggccgtgccatc
ggccggctcaccgatctgggctggggcgcgcggctgcgtcggctgctcgccgaggaggac
gccgaggtgcccgacgacgtggtggcggctgcggtcaaggtgctggcgtcctgggactgg
gacaccaggccgaccgccgtgatggccctggactccgacacccatcccacgctgatcacg
tcgttggcccgtcgactcgccgagctcggtcggctgacggatctcggcacgctgcactac
gacccgcagcgccggccggtgaccgcggtgaactcggcgtaccgcgtggccgccctacag
gggtcgtggtcggcgccggattgtccgttcgacgggccggtgctgctggtcgacgatctg
gccgacacgggatggacgttcacgatggctgcccgcgccgtgcgtgcggcgggcgccccc
gccgtgctgccgttcgcgctggcgtcgagcagctag
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