Methylocapsa polymorpha: RZS28_01640
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Entry
RZS28_01640 CDS
T11074
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
mpol Methylocapsa polymorpha
Pathway
mpol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RZS28_01640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpol03400
]
RZS28_01640
Enzymes [BR:
mpol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RZS28_01640
DNA repair and recombination proteins [BR:
mpol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RZS28_01640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TerS_C
RL10P_insert
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
WOJ90042
LinkDB
All DBs
Position
320853..321116
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AA seq
87 aa
AA seq
DB search
MSKTAPPEQNEDVAALPFERALAELEQIVDQLEKGSVALEESIAIYARGQALKAHCENLL
RNAEQRIEKITLGPDGRPSGTEPLDVE
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaccgcgccgcccgagcaaaatgaagacgtcgccgcgctgcctttcgaacgc
gcgctcgccgaactcgaacagatcgtcgatcagctcgaaaagggctctgtcgcgcttgag
gaatcgattgcgatctatgcgcgcggccaggcattgaaggcgcattgtgaaaatctgctt
aggaacgccgagcagaggatcgaaaagatcactttgggcccggacggccgcccgagcgga
acggagccgctcgacgtcgagtga
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