Methylocapsa polymorpha: RZS28_02235
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Entry
RZS28_02235 CDS
T11074
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mpol Methylocapsa polymorpha
Pathway
mpol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RZS28_02235 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpol03021
]
RZS28_02235 (rpoC)
03400 DNA repair and recombination proteins [BR:
mpol03400
]
RZS28_02235 (rpoC)
Enzymes [BR:
mpol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RZS28_02235 (rpoC)
Transcription machinery [BR:
mpol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RZS28_02235 (rpoC)
DNA repair and recombination proteins [BR:
mpol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RZS28_02235 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
ApbA_C
Motif
Other DBs
NCBI-ProteinID:
WOJ90145
UniProt:
A0ABZ0HT95
LinkDB
All DBs
Position
complement(452264..456466)
Genome browser
AA seq
1400 aa
AA seq
DB search
MNQEVMNLFNPVVQPQAFDQIQISIASPEKILSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLSRVRRERMGHISLAAPVAHIWFLKS
LPSRIGLLLDMTLKDLERILYFESYIVLDPGLTPLKDRQLLNEEDYLRAQDEYGQDSFTA
LIGAEAIREILRNMDLAGIAEQLKIEIAQSTTELKPKKLAKRLKIIEAFIHSGNKPEWMI
LTEVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PDLKLHQCGLPKKMALELFKPFIYSRLDAKGLSATVKQAKKLVEKEKPEVWDILDEVIRE
HPVMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSLMRDGEPGQGMAFANIGEIEHAIQ
AKAITLHTRIKGRAWTYDSDGQRVSKIFDTTPGRLILGQLLPNHTKIPFDVVNKLMTKKE
ISNMIDIVYRNCGQKETVIFCDRIMALGFREAFKAGISFGKDDMVVPETKPRIIAETSAL
AKEYEQQYNDGLITHGEKYNKVVDAWAKCSDKLAEEMMLRISSVQKDESGRDKPINSIYM
MSHSGARGSPTQMKQLAAMRGLMTKPSGEIIESPIISNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDSIITTVDCGSQNGIRMRAIIDAGQIVASLAIRILGRTA
AEDLKDVDGGIIVAAGEMIQEWHIDRINAAGIQEVKIRSVLTCEAKNGVCGKCYGRDLAR
GTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQIADQSFIESNFEGTVKVRNRHLA
RNSEGDLMVMARNVAIVIEGPDGVERAVHRVQYGARLKVDEGDKIKRGQRIAEWDPYTRP
ILTEIDGVIGFEDLVEGASMTETIDEATGIAKRVVIDWRLNQRSATLKPSIVIKTADGKI
GKLQRGGDARYTLPVESIIGVDPGGEVKAGDIIARISMESAKTRDITGGLPRVAELFEAR
RPKDHAIIAEASGTVQFGRDYKNKTRISIIPNEEGAEPIEYLIPKGKHIHLQDGDVVEKG
DYIVDGNPAPHDILAIKGVEELAAYLVNEIQEVYRLQGVSINDKHIEVIVRQMLQKVDIV
DPGDTDFLSGEQVDQTELDEANTKAIEEGKKPASGTPVLLGITKASLQTRSFISAASFQE
TTRVLTEAAVNGKADTLEGLKENVIVGRLIPAGTGAAMSKLRRVAAMRDELILAQKAETS
KPAAPEPTPLLEQPRVTVDE
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaggtcatgaatctcttcaatccggtcgtccagccgcaggctttcgatcag
atccagatatcgatcgccagcccggagaagattctgtcctggtccttcggcgaaatcaag
aagccggagacgatcaactatcggacgttcaagccggagcgcgacggcctgttctgcgcc
cgcatctttggtccgatcaaggattacgagtgcttgtgcggcaagtacaagcggatgaaa
tacaagggcgtcatctgcgagaaatgcggcgtcgaagtgaccttgtcgcgcgtgcggcgc
gagcgcatgggacatatttcgcttgccgcgccggtcgcgcatatctggttcttgaagtcg
ctgccgtcccgcatcggcctcttgctcgatatgacgctgaaggatctcgagcgcatcctt
tatttcgaatcctatatcgtgctcgatccgggcttgacgcctttgaaggatcgccagctc
ctcaatgaggaggactatctgcgcgcgcaggatgaatatggccaggattccttcaccgct
ctgatcggcgccgaagcgatccgcgagatcctgcgcaacatggaccttgccgggatcgcg
gagcagctcaagatcgagatcgcccagtccaccacggaattgaagccgaagaagctcgca
aagcggctaaagatcatcgaggcgttcatccattctggcaacaagccggagtggatgatt
ctcaccgaggttccggtcattccgccggacctgcggccgcttgtgccgcttgacggcgga
aggttcgcgacctccgatctcaacgatctctatcgccgcgtcatcaaccgcaacaaccgg
ctgaagcggctgattgaattgcgcgcgccagacatcatcgtgcgcaatgaaaagcgcatg
ctgcaggaggctgtcgacgctttgttcgacaatggccggcgcggccgcgtcatcaccggc
gccaacaagcggcccttgaagtcgcttgcggacatgttgaagggcaagcagggtcggttc
cgccagaacctgctcggcaagcgcgtcgattattccggccgctcggtcatcgtcgtcggt
cccgatctcaagctgcatcaatgcggcttgccgaagaagatggcgctggagcttttcaag
cccttcatctattcgcggctcgacgcgaagggcctgtcggcgacggtcaaacaggcgaag
aaactcgtcgaaaaggaaaagccggaagtctgggacattctcgacgaggtcatccgcgag
catccggtcatgttgaaccgggctccgaccttgcaccgcctcggcatccaggctttcgag
ccgaagttgatcgagggcaaggcgatccagttgcatccgcttgtctgcgcggcgttcaac
gccgatttcgacggcgaccagatggcggttcacgtgcctttgtcgctcgaggctcagctt
gaagcgcgcgtgctcatgatgtcgaccaacaatatcctgcatccggccaatggtcagccg
atcatcgtgccgagccaggatatcgtcctcggtctctattatgtttcgctgatgcgcgac
ggcgagcccggtcaaggcatggccttcgccaatatcggcgagatcgagcacgccatacag
gccaaggcgatcaccttgcatacgcggatcaagggccgcgcatggacctatgattccgac
ggccaacgcgtgtcaaagatcttcgacaccacgcccggccgtttgatccttggccagctt
ctgcccaaccacacgaagattcctttcgacgtcgtgaacaagctcatgacgaagaaggaa
atctccaacatgatcgacatcgtctaccgcaattgcgggcagaaggagacggtcatcttc
tgcgaccggatcatggcgctcggcttccgcgaggcgttcaaggccggcatttccttcggc
aaggacgacatggtcgtgcccgagacgaagccgcgcatcattgcggagacgagcgcgctc
gccaaggaatatgagcagcaatataacgatggcctcatcactcatggcgagaaatacaac
aaggtggtcgacgcctgggcgaaatgctccgacaagctcgccgaggagatgatgttgcgc
atctcgtccgtgcaaaaggacgaatctggccgcgacaagccgatcaactcgatctacatg
atgtcgcattccggggcgcgtggctcgccgacgcagatgaagcaactcgccgcgatgcgc
ggattgatgacgaagccttcgggcgagatcatcgagagcccgatcatctcgaacttcaag
gaagggctcaccgtgctcgagtatttcaactcgacgcatggcgcccgcaagggcctcgcc
gacacggctctgaagaccgcgaattccggctatctgacccgccggctcgtcgacgtcgcg
caggactcgatcatcacgacggttgactgcggctcccagaacggcatccgcatgcgcgcg
atcatcgacgccggccagatcgtcgcgtcgctcgccatccgcattctcggacggacggca
gccgaggacttgaaggacgtcgacggcggaattatcgtcgccgcgggcgagatgatccag
gaatggcatatcgaccgcatcaacgcggccggcatccaggaagtgaagatccgctcggtg
ctgacctgcgaagccaagaacggcgtctgcggcaagtgttatggccgcgatctcgcgcgt
ggaacgccggtcaatatgggcgaggcggtgggcgtcatcgccgcgcagtcgatcggtgag
ccgggcacgcagctcacgatgcgcacgttccatatcggtggcgccgcgcagatcgccgat
cagtccttcatcgaatccaatttcgagggaacggtgaaggtccgcaatcggcatctcgcc
cgtaattccgagggcgacttgatggtcatggcgcgcaatgtcgcgatcgtcatcgaaggc
ccggatggcgtcgagcgcgcggtccatcgcgtccaatatggcgcgaggctcaaggtcgac
gaaggcgacaagatcaagcgtggccagcgcatcgccgagtgggatccctacacccggccg
atcctgaccgagatcgacggcgtcatcggcttcgaggatcttgtcgaaggcgcctcgatg
accgagaccatcgacgaggcgacaggcatcgccaagcgcgtggtcatcgactggcggctc
aatcaacggtcggcgaccttgaagccgtcaatcgtgatcaagactgcggatggcaagatc
gggaagctgcagcgcggcggcgacgcgcgctacacgctgccagtcgagtcgatcatcggc
gtcgacccgggcggcgaggtcaaggcgggcgacatcatcgcccgcatctcgatggaatcg
gcgaagacgcgcgacatcacgggcggccttccacgcgtcgccgaattgttcgaggcgcgc
cggccgaaggatcatgcgatcatcgccgaggcctcgggcacggtgcagtttggccgcgac
tacaagaacaagacgcgcatctcgatcattccgaacgaggagggcgccgagccgatcgaa
tatttgatccccaagggcaagcatatccatctccaggacggcgacgtcgtggagaagggc
gattatatcgtcgatggaaatccggccccgcacgacattttggcgatcaagggagtcgag
gagctcgccgcctatctcgtcaacgagatccaggaagtctatcgcctgcagggcgtcagc
atcaacgacaagcacatcgaggtgattgtccgccagatgctgcagaaggtcgatatcgtc
gatcccggcgacaccgattttctatccggcgagcaggtcgatcagaccgaactcgatgag
gccaatacaaaggcgatcgaggagggcaagaagccggcctccggaaccccggtcctgctc
gggatcaccaaagcttcgctgcagacgcggtcctttatttccgccgcgtccttccaggag
acgacccgcgtgctgaccgaggcggccgttaacggaaaggccgacacgctcgaagggctg
aaggaaaacgtcatcgtcggccggctcatcccggcgggcaccggcgcggccatgtctaaa
ctgcgccgggtcgcggccatgcgcgacgagctcatattggcgcaaaaggcggagacatcg
aagccggccgcgcctgagccgacgcccttgctcgaacagccgcgcgtgaccgtggacgaa
tag
DBGET
integrated database retrieval system
