Methylocapsa polymorpha: RZS28_03265
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Entry
RZS28_03265 CDS
T11074
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mpol Methylocapsa polymorpha
Pathway
mpol03030
DNA replication
mpol03410
Base excision repair
mpol03420
Nucleotide excision repair
mpol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RZS28_03265 (polA)
03410 Base excision repair
RZS28_03265 (polA)
03420 Nucleotide excision repair
RZS28_03265 (polA)
03440 Homologous recombination
RZS28_03265 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpol03032
]
RZS28_03265 (polA)
03400 DNA repair and recombination proteins [BR:
mpol03400
]
RZS28_03265 (polA)
Enzymes [BR:
mpol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RZS28_03265 (polA)
DNA replication proteins [BR:
mpol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RZS28_03265 (polA)
DNA repair and recombination proteins [BR:
mpol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RZS28_03265 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RZS28_03265 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Taq-exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WOJ90333
UniProt:
A0ABZ0HUE9
LinkDB
All DBs
Position
668836..671877
Genome browser
AA seq
1013 aa
AA seq
DB search
MSLVHRPVQAGDHVFLVDGSSFVFRAYFQSIRQDAKYNYRSDRLPTGAVRLFCTKLFQFV
REGATGIKPTHLAIIFDKSENSFRKELYPPYKANRSEPPEDLVPQFPLMRAAVRAFGLLP
VEQDRYEADDLIATYAREARERGADVLIISADKDLMQLVGPGVAMYDPASGEAGAKGARE
ERRIGPEEVYAYFGVPPEKVVDVQALAGDSTDNVPGARGVGLKTAAQLINEYGDLDTLLV
RAGEIKQPKRRETLTDPQSVALINVSKQLVSLVRDAPLEVPLDDLGLHAPDAKTLVSFFK
AMEFTTITKRAAEAYQIDAASVEPAPAFVGEAGWRGRNGEPFSAKAESETPEAPQLGDAQ
QPKRNARYGPPAAPAPVATGPGQLAAERAEAARAETFDVKAYKTISSFEALDACIAAAKE
AGYIAIDTETSSLDAMQAELVGISLCVTPGRAFYIPLRHRSEGGGDLFGGGDLIPGQLPA
DEVLARLKPLLEDRSVLKIAQNMKFDWLVFRQCGIEVRPVEDTMLLSYVLDAGRTDHGMD
VLSEKHLGHKPIQFGEVAGSGRTFIGFARVAIDRATEYSAEDADVALRLWRTLKPRLPAE
RMTAVYEGLERPMIEVLSRMERRGIEIDRAILARLSGEFAQDMARLEAVIYELAGESFNL
GSPKQLGDILFGKMGLAGAKKTATGAWSTAAGVLDDLAAEGNELAARILDWRQLAKLKST
YTDALPSFVNPSTGRVHTSYALAATTTGRLSSSEPNLQNIPVRNEAGRKIRRAFIAGAGH
KLISADYSQIELRLLAHIADIPQLKAAFAEGLDIHAMTASEMFGVPVAGMPPEVRRRAKA
INFGIIYGISAFGLANQLGIAREEAGAYIKRYFERFPGIRAYMDATKKTARESGFVTTIF
GRKCHYPRIASSNPSERAFNERAAINAPIQGSAADIIRRAMIRMDAALAEAKLSAQMLLQ
VHDELVFEAPDGEVEATIALVRRVMADAPHPFVQLSAPLQVDAKAAQNWDEAH
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtccttagtgcaccgccccgttcaggcaggagaccatgtgttcctggttgacgggtca
tcttttgtctttcgcgcctatttccaatccattcggcaggatgcgaaatataattatcgc
tcggaccgtctgccgacaggggcggtccggctcttctgcaccaagcttttccagttcgtg
cgcgaaggcgcgacagggatcaagccgacccatctcgcgatcattttcgataagtccgaa
aactccttccgcaaggagctttaccccccttacaaagccaatcgttcggagcctcctgaa
gatctggtcccgcaatttcccttgatgcgggccgcggttcgcgccttcggccttctcccg
gtcgagcaggaccgctacgaggccgacgatcttatcgcgacctatgcgcgggaggcgcgc
gagcgcggggccgacgttctcatcatctccgccgacaaggatttgatgcagctcgtcggg
ccgggcgtcgccatgtatgacccggcctccggcgaagcaggcgccaagggcgcgcgcgag
gagcggcggattgggccggaggaggtttacgcctatttcggcgttccgccggaaaaggtc
gtcgacgttcaggcgctcgccggcgattcgaccgataatgtgccgggcgcgcgcggcgtc
gggctgaagacggcggcgcagctcatcaatgaatatggcgatttggatacgctcctcgtc
cgcgcgggcgagatcaagcaaccgaaacgccgcgagaccctcaccgatccgcaaagcgtc
gcgctaatcaatgtatcgaagcagctcgtctctctggtccgcgatgcgccgctcgaagtg
ccgctcgacgatctgggccttcatgcgcccgacgccaagactctcgtttcattcttcaag
gcgatggaattcacgaccatcaccaagcgggcggccgaagcctatcaaatcgacgcggcg
tcggtcgagccagcccccgccttcgtcggcgaggccggatggcgcggccgcaacggagag
cctttttccgccaaagcggaaagcgagacgccggaagcgccccagctaggggatgcgcag
cagccaaaaagaaacgcccgctacggcccgccggccgctccggcgcccgtggccacagga
cctggccaactcgccgccgagcgcgccgaagccgcccgcgccgagacattcgacgtcaaa
gcctacaagacgatttcaagttttgaagcgctcgacgcctgcatcgccgccgcgaaggag
gccggttatatcgcaatcgacacggaaacctcctcgctcgacgccatgcaggccgaactc
gtcggcatttccttatgcgtcacgccgggccgcgccttctacatcccgctgcgccatcgc
agcgaggggggcggcgaccttttcggcggcggcgatctcatccccggccaattgcccgcc
gatgaagttctcgcccgcttgaaaccgcttctggaagaccgcagcgtcttgaagatcgcg
cagaacatgaagttcgattggctggtcttccgccaatgcggaatcgaggtccgcccagtc
gaagacacgatgctgctctcctatgtgctcgacgccggccgcaccgatcacggaatggac
gtgctgagcgagaagcacctggggcataagccaatccagtttggcgaagtcgccggctct
ggccggacattcatcggattcgcgcgggtcgccatcgacagggcgacggaatattcggcg
gaggacgcagacgtcgctttgcgtctttggcggaccctgaagccgcgcctgcccgcggag
cgcatgaccgccgtctatgaagggctggagcgcccgatgatcgaggttctctcgcgcatg
gagcggcgcggcatagagatcgaccgggcgatcctcgcccggctttcgggcgaattcgcg
caggacatggcgcggctcgaggccgtgatctacgagctcgccggagagagcttcaatctc
ggttcgccaaagcagctcggcgatattctgttcggcaagatgggcctcgccggcgccaag
aaaaccgcgacaggcgcctggtcgacggcggcgggcgtcctcgatgacctcgccgcagag
ggcaatgagctcgcggcccggattctcgactggcgacagctcgcaaagctcaaatcgacc
tatacggacgcgctgcccagcttcgtcaatccttcgactggacgggtgcatacgtcctac
gccctcgccgcgacgacgacgggcaggctctcctcgtcggagccgaatcttcagaatatt
ccggtgcgcaatgaagctggccgcaagatccgccgggcttttatcgcgggcgcgggacat
aagctcatctcggccgattactcgcaaatcgaattgcggctgctcgcccatatcgccgat
attccgcagctcaaggcggccttcgcagaaggcctcgacatccatgcgatgaccgcctcc
gagatgttcggcgtgccggtcgcgggcatgccgccagaggtgcgccgccgcgccaaggcg
atcaatttcggcatcatctacggcatttcagcctttggcctcgccaaccagctcggcatc
gcgcgggaagaggcgggcgcctacatcaagcgctatttcgagcgctttcccggcattcgg
gcctatatggacgcgacgaaaaaaaccgcgcgcgaaagcggattcgtgaccacgattttc
gggcgcaaatgccattatccgcgcatcgcctcctcaaacccgtcggaacgcgccttcaac
gagcgcgccgcgatcaatgcgccgatccagggctccgccgccgacatcatccgccgcgcc
atgatccgcatggatgcggcgctcgcggaggcgaagctgtccgcgcaaatgctactgcaa
gtgcatgacgaactcgtgttcgaggcgcccgacggcgaggtcgaagcgaccatcgcgctt
gttcgcagggtcatggcggatgcgccgcatccctttgtacagctttccgcgcccttgcag
gtcgacgccaaggctgcgcagaattgggacgaggcgcattag
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