Methylocapsa polymorpha: RZS28_11465
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Entry
RZS28_11465 CDS
T11074
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mpol Methylocapsa polymorpha
Pathway
mpol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RZS28_11465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpol03021
]
RZS28_11465
03400 DNA repair and recombination proteins [BR:
mpol03400
]
RZS28_11465
Enzymes [BR:
mpol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RZS28_11465
Transcription machinery [BR:
mpol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RZS28_11465
DNA repair and recombination proteins [BR:
mpol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RZS28_11465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
WOJ88445
LinkDB
All DBs
Position
2486477..2487544
Genome browser
AA seq
355 aa
AA seq
DB search
MIGQAPDRRLRIEKGAIVIQKNWQELIKPNKLEVIPGDDPKRLATVVAEPLERGFGLTLG
NSLRRILLSSLQGAAITSVHIDGVLHEFSSIPGVREDVTDIVLNIKDIAIKMPGDGPKRM
VLKKQGPGKVTAGDIATVGDISILNPGLVICTLDEGAEIRMEFTVNSGKGYVAADRNRAE
DAPIGLIPIDSLYSPVKKVSYRVENTREGQILDYDKLTMQVETNGSLTPEDAVAFSARIL
QDQLNVFVNFEEPRRVETTPSIPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLI
QKSEAEMLRTPNFGRKSLNEIKEVLAQMGLHLGMEVTGWPPDNIDELAKRFEEHY
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgattggccaggcgccggaccggcgccttcgcattgagaaaggcgccatcgtgattcaa
aagaactggcaggagcttatcaagccgaacaagctcgaggtcatcccgggcgacgatccg
aagcgcctcgccaccgtcgtagctgagccgctcgaacgcggcttcggcctgaccttgggc
aattccctgcgccgcattctcctctcgtcgctgcagggcgcggcgatcacctcggtccat
atcgacggcgttctccacgaattttcgtccatccccggcgtgcgcgaggacgtgaccgac
attgtgctgaatatcaaggacatcgcgatcaagatgcccggcgacggcccaaagcgcatg
gtgctgaagaagcaaggtcccggcaaggtcaccgcgggcgatattgcgacggtcggcgat
atttcgattctgaaccctggactcgtcatctgcacccttgacgagggcgccgagatccgc
atggaattcacggtcaactccggcaagggctatgtcgcggcggaccgcaatcgcgccgaa
gacgcgccgatcggcctcattccgatcgacagcctctattctccggtcaagaaagtcagc
taccgcgtcgaaaatacccgcgaagggcagattctcgattacgacaagctgaccatgcag
gtcgagaccaatgggtccctgacgccggaggacgcggtcgctttctccgcccggatcctg
caggaccagctcaatgtcttcgtcaatttcgaggagccgaggcgcgtcgagacgacgccg
tcgatccccgagcttgcgttcaatccggcgctgctcaagaaagtcgacgaactcgaattg
tcggtgcgttcggccaattgcctgaagaacgacaatatcgtctatatcggcgatctcatc
cagaagagcgaagcggaaatgctcaggacgccgaatttcggccgcaagtcgctgaatgag
atcaaggaagttctggcccagatgggcctgcatcttggcatggaagtcactggctggccg
ccggacaatattgacgagctcgccaagcgtttcgaagaacattactga
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