Methylocapsa polymorpha: RZS28_12110
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Entry
RZS28_12110 CDS
T11074
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mpol Methylocapsa polymorpha
Pathway
mpol00470
D-Amino acid metabolism
mpol00550
Peptidoglycan biosynthesis
mpol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mpol00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RZS28_12110 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RZS28_12110 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mpol01011
]
RZS28_12110 (murD)
Enzymes [BR:
mpol01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RZS28_12110 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mpol01011
]
Precursor biosynthesis
Amino acid ligase
RZS28_12110 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
TrkA_N
KARI_N
NAD_binding_2
HI0933_like
NAD_binding_7
NAD_Gly3P_dh_N
YjeF_N
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
WOJ88563
UniProt:
A0ABZ0HPK0
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All DBs
Position
2628069..2629463
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AA seq
464 aa
AA seq
DB search
MTPVTAYKDKHVAVFGLGGSGFATAQALVAGGARVLVWDDNEHAREKARAAGLRIENLAT
IEWRDFTSLVLSPGVPLTHPAPHWTVLKAREAGVEIIGDIELFCRERRKIAPKSPFVAIT
GTNGKSTTTALVSHLFRSFGFAVEVGGNIGTPILALQPPAQDRVHVIECSSFQIDLAPSL
DPSVGILLNVTPDHLDRHGSIENYAAIKARLVRNADQAVIGVDDKFTLAIADELRKAGRP
LTLVSVTQPTIENGVVLDGPHIMRRAEGRSSEIADLAGIASLRGAHNGQNAAAAVAALGS
LADDLDRLRKGLQTFPGLAHRLEEVGRKGKVLFVNDSKATNADAAEKALLSFDKVFWIIG
GRAKQGGIEPLRPLFSKVVKAYLIGEASEAFAQTIGDAFPFEICGALETAVPSAARDAEA
SDIAEPVVLLSPACASFDQFSDFEKRGDRFREIVKALLAAETQV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggtcaccgcctataaggacaagcatgtcgccgtgttcggtctcggcggctcg
ggattcgcgacggcgcaggctctggtcgcgggcggcgctcgcgtcctggtctgggacgat
aatgaacatgcgcgggaaaaggcgcgcgcggcgggcctcagaatcgaaaatcttgcgact
attgagtggcgagatttcacttcgcttgttctttctccgggcgtgcccctgacgcatccg
gcgccgcattggaccgtcttgaaggcgcgagaagcaggagtcgaaatcatcggcgacatc
gagctcttttgccgagaacgccgaaagatcgcgccgaaatcgcctttcgtggcgatcacc
ggaacgaatggaaaatcgacgacgacggccctcgtctcgcatcttttccgcagtttcggt
ttcgctgtcgaggttggcggcaatataggcactccgatcctggccttgcagccgccggcg
caggaccgcgttcacgtcattgaatgctcgtccttccagatcgatctcgcgccctcgctc
gatccctcggttggaattctcctcaacgtgacgcccgatcatctcgaccggcatgggtcg
attgaaaattacgccgcgatcaaggcgaggctggtgcgcaacgccgatcaggccgtcatc
ggcgtcgacgataaattcaccctcgccatcgccgatgagttgcgtaaggcgggccgtccg
ctgacccttgtttcagtgactcagccgacgattgagaatggcgttgttctcgatggcccc
catatcatgcgccgagccgaaggccgctcgagcgagattgccgaccttgcgggtatcgcc
tcgctgcgcggggcgcataatggccagaacgccgccgcggcggtcgcggcgctgggttcc
ctcgccgacgatctcgatcgcttgaggaaaggcttgcagacattcccggggctcgcgcat
cggctggaggaggtcgggcgcaagggaaaggttctcttcgtcaatgattccaaggcgacc
aatgccgacgcggccgaaaaagcgctgctttccttcgacaaggtcttttggatcatcggc
ggccgggcgaaacagggcggcatcgagcctttgaggcccttgttctcaaaagtcgtcaag
gcctatctgattggcgaggccagcgaggctttcgcgcaaacgatcggcgatgctttccct
tttgagatttgcggcgcgctcgagacggccgtaccgagtgcggcgcgggacgccgaggcg
agcgacatcgccgagcccgtcgttctgctgtcgccggcctgcgcgtccttcgatcaattt
tccgatttcgagaagcgcggagatagatttcgcgagatagtcaaagcgttgctggcggcg
gagacgcaagtctga
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