Methylocapsa polymorpha: RZS28_13525
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Entry
RZS28_13525 CDS
T11074
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mpol Methylocapsa polymorpha
Pathway
mpol00300
Lysine biosynthesis
mpol00470
D-Amino acid metabolism
mpol01100
Metabolic pathways
mpol01110
Biosynthesis of secondary metabolites
mpol01120
Microbial metabolism in diverse environments
mpol01230
Biosynthesis of amino acids
Module
mpol_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mpol00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RZS28_13525 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RZS28_13525 (lysA)
Enzymes [BR:
mpol01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RZS28_13525 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WOJ88823
LinkDB
All DBs
Position
complement(2926604..2927872)
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AA seq
422 aa
AA seq
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MNHFEMKNGVLHAEDVDLSALADEVGTPFYCYSLATLTRHYDVFKAAFADVDSLVCYAVK
ANSNQAVLTALARRGAGMDVVSEGELRRALAAGAAPEKITFSGVGKTQSEMAFALDQGIF
CFNVESEPELLVLSSLAAAKGRIAPVALRVNPDVDAKTHAKISTGKAENKFGIPLSRARE
VYAEAAALPAIKIAGVDIHIGSQITDLAPFDDAFRLVADFVRALRADGYAIEHIDLGGGL
GIPYREGDDPESYRPERYAQIVKSRLGGLGCRLIFEPGRLIVGNAGILLTRVIFVKRGEA
KTFVIVDAAMNDLVRPTLYEAHHEIKPVRADKDARELTADIVGPVCETGDFLALSRKLPE
PQPGDLLAIMSAGAYGAVQAGTYNSRLLAPEVLVSGDRSAIVRPRGTYDDLIGLDKIPAW
LP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaatcactttgaaatgaagaacggcgtcctgcacgccgaggacgtcgatctttccgct
ctggcggacgaggtcggcacgcctttttactgctattcgctagcgacgctcacgcgtcat
tacgacgtgttcaaggcggctttcgccgacgtcgattccctggtctgctacgccgtgaag
gccaattccaaccaagccgtgctcacggccctggcgcggcggggcgccggcatggacgtc
gtgtccgagggcgagttgcgccgggccctggcggcgggcgcggcgcctgaaaagatcact
ttttcgggcgtgggcaagacgcaaagcgaaatggctttcgcgctcgatcagggcatattt
tgcttcaatgtcgagtccgagcctgagcttctcgttttgtcgagcctcgccgcggcgaaa
ggccggatcgctccggtggcgcttcgcgtcaaccccgacgtcgacgccaagacccacgcc
aaaatttcaaccggcaaggcggagaacaagttcggcattcccttgagccgcgcccgcgaa
gtctatgccgaagccgccgccctgcccgcgatcaagatcgcgggcgtcgatattcatatc
ggttcgcaaatcaccgatctggcgccgtttgacgacgctttccgccttgtcgccgatttc
gtgcgcgcgctgcgcgccgacggctacgccatcgagcatattgacctcggcggcggcctc
ggcattccttaccgggagggagacgatcccgagagctatcgcccggagcgctacgcgcaa
atcgtcaagtcccggctcggcggcctcggctgccgcctaattttcgagccggggcggctc
atcgtcggcaatgccggcattctcctgacccgggtcattttcgtgaagcgcggcgaagcc
aagaccttcgtcatcgtggatgcggcgatgaacgatctggtgcgccccaccctttatgaa
gcgcatcatgagatcaagcccgtccgcgcagacaaagacgcgcgcgagcttacggccgac
atcgtcgggccggtgtgcgaaaccggcgattttctcgcgctttcaagaaaactgccggag
cctcaaccgggtgatcttctggcaattatgtccgccggcgcttatggcgcggtgcaggcc
ggaacctataattcgcggctcctcgcgcccgaggttctcgtcagcggcgaccggtcggcc
atcgtgcgcccacgcgggacatacgatgatttgatcgggttggacaaaattccggcttgg
ttgccctag
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